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CDS: AC3.6
| AC3.6 | SMap | S_parent | Sequence | AC3 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 141 | ||
| 189 | 348 | ||||
| 961 | 1469 | ||||
| 1526 | 1693 | ||||
| DB_info | Database | TREMBL | Q17402_CAEEL | ||
| TrEMBL_AC | Q17402 | ||||
| NDB | GI_number | 3873648 | |||
| NCBI | RefSeq | NM_073269 | |||
| Protein_id | AC3 | CAA94869 | 1 | ||
| DB_remark | C. elegans COL-151 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | AC3.6 | |||
| Corresponding_transcript | AC3.6 | ||||
| Corresponding_protein | WP:CE05136 | ||||
| Corresponding_PCR_product (3) | |||||
| Corresponding_RNAi_reagent | Cenix:18-a1 | ||||
| Matching_cDNA | yk362c2.5 | Inferred_automatically | transcript_builder.pl | ||
| yk546g1.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:18-a1 | ||||
| WB_RNAi_result | Cenix:18-a1 | ||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_AC3.6 | ||||
| 188045_at | |||||
| Aff_AC3.6 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
