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CDS: B0412.1b
| B0412.1b | SMap | S_parent | Sequence | B0412 | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | Q86GT3_CAEEL | ||
| TrEMBL_AC | Q86GT3 | ||||
| NDB | GI_number | 47270779 | |||
| Protein_id | B0412 | AAO61446 | 3 | ||
| DB_remark | C. elegans DAC-1 protein; contains similarity to Pfam domain PF02437 (SKI/SNO/DAC family)contains similarity to Interpro domain IPR003380 (Transforming protein Ski) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | EMBL | BI174738 | ||
| Visible | Gene | B0412.1 | |||
| Corresponding_transcript | B0412.1b | ||||
| Corresponding_protein | WP:CE33550 | ||||
| Corresponding_PCR_product | cenix:328-g1 | ||||
| mv_B0412.1 | |||||
| sjj_B0412.1 | |||||
| TH:328G1 | |||||
| Corresponding_RNAi_reagent | Cenix:328-g1 | ||||
| sjj_B0412.1 | |||||
| TH:328G1 | |||||
| Matching_cDNA | OSTF052F3_1 | Inferred_automatically | transcript_builder.pl | ||
| RNAi_result | Cenix:328-g1 | ||||
| JA:B0412.1 | |||||
| TH:328G1 | |||||
| WB_RNAi_result | TH:328G1 | ||||
| JA:B0412.1 | |||||
| MV_SV:mv_B0412.1 | |||||
| Cenix:328-g1 | |||||
| GO_term | GO:0005634 | IEA | Inferred_automatically | ||
| Variation | gk198 | ||||
| gk211 | |||||
| tm665 | |||||
| Microarray_results | SMD_B0412.1 | ||||
| 189843_at | |||||
| Aff_B0412.1 | |||||
| Remark | removed the first exon based on EST data (OSTF052F3_1) [as 20030225] | ||||
| extended the 5' exon [tb 20040305] | |||||
| moved the start of the 5' exon based on suggestion from Adam Brown and inconclusive evidnece either way of the OST data. [tb 20040505] | |||||
| this isoform is based on EMBL accession BI174738 | |||||
| Method | curated |
