Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: C06G4.2a   

C06G4.2aSMapS_parentSequenceC06G4
Structure Source_exons 1102
197320
505642
15631691
17392181
22242382
24532715
27762907
32823751
37963901
39504007
44974586
46334751
48554864
DB_info Database (3)
Protein_idC06G4 AAV588871
DB_remarkC. elegans CLP-1 protein; contains similarity to Pfam domains PF01067 (Calpain large subunit, domain III), PF00648 (Calpain family cysteine protease)contains similarity to Interpro domains IPR000169 (Peptidase, cysteine peptidase active site), IPR001300 (Peptidase C2, calpain)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBL BJ124914
Visible GeneC06G4.2
Corresponding_transcript C06G4.2a.1
C06G4.2a.2
Corresponding_proteinWP:CE37743
Corresponding_PCR_product (8)
Matching_cDNA yk1317a01.5 Inferred_automaticallytranscript_builder.pl
yk1110g05.5 Inferred_automaticallytranscript_builder.pl
yk11f10.5 Inferred_automaticallytranscript_builder.pl
yk1099f01.5 Inferred_automaticallytranscript_builder.pl
WB_RNAi_result (10)
GO_term (5)
Variation (5)
Microarray_results (7)
Brief_identificationcalpain
Remark (6)
Associated_featureWBsf002547
Methodcurated