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CDS: C06G4.2b
| C06G4.2b | SMap | S_parent | Sequence | C06G4 | |
|---|---|---|---|---|---|
| Structure | Source_exons (14) | ||||
| DB_info | Database | SwissProt | SwissProt_ID | CAN_CAEEL | |
| SwissProt_AC | P34308 | ||||
| NDB | GI_number | 55710081 | |||
| NCBI | RefSeq | NM_066339 | |||
| Protein_id | C06G4 | AAV58888 | 1 | ||
| DB_remark | C. elegans CLP-1 protein; contains similarity to Pfam domains PF01067 (Calpain large subunit, domain III), PF00648 (Calpain family cysteine protease)contains similarity to Interpro domains IPR000169 (Peptidase, cysteine peptidase active site), IPR001300 (Peptidase C2, calpain) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding (2) | ||||
| Isoform | Accession_evidence | EMBL | BJ785249 | ||
| Visible | Gene | C06G4.2 | |||
| Corresponding_transcript | C06G4.2b.1 | ||||
| C06G4.2b.2 | |||||
| C06G4.2b.3 | |||||
| Corresponding_protein | WP:CE37744 | ||||
| Corresponding_PCR_product (8) | |||||
| Matching_cDNA (36) | |||||
| WB_RNAi_result (10) | |||||
| GO_term (5) | |||||
| Variation (5) | |||||
| Microarray_results (7) | |||||
| Remark | merged C06G4.3 into this based on EST data 011009 db | ||||
| SL1 trans-spliced; see yk891b07.5 | |||||
| added an internal exon based on EST data(yk1568e03.3)[20041110 po] | |||||
| this isoform is based on EMBL accession BJ785249 | |||||
| Associated_feature | WBsf002547 | ||||
| WBsf016643 | |||||
| Method | curated |
