CDS: C06G4.2d
C06G4.2d | SMap | S_parent | Sequence | C06G4 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 102 | ||
197 | 320 | ||||
1296 | 1370 | ||||
1563 | 1691 | ||||
1739 | 2181 | ||||
2224 | 2382 | ||||
2453 | 2715 | ||||
2776 | 2907 | ||||
3282 | 3751 | ||||
3796 | 3901 | ||||
3950 | 4007 | ||||
4497 | 4586 | ||||
4633 | 4751 | ||||
4855 | 4864 | ||||
DB_info | Database | SwissProt | SwissProt_ID | CAN_CAEEL | |
SwissProt_AC | P34308 | ||||
NDB | GI_number | 20198772 | |||
NCBI | RefSeq | NM_171886 | |||
Protein_id | C06G4 | AAM15551 | 1 | ||
DB_remark | C. elegans CLP-1 protein; contains similarity to Pfam domains PF01067 (Calpain large subunit, domain III), PF00648 (Calpain family cysteine protease)contains similarity to Interpro domains IPR000169 (Peptidase, cysteine peptidase active site), IPR001300 (Peptidase C2, calpain) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | BJ102973 | ||
Visible | Gene | C06G4.2 | |||
Corresponding_transcript | C06G4.2d | ||||
Corresponding_protein | WP:CE30486 | ||||
Corresponding_PCR_product (8) | |||||
Corresponding_RNAi_reagent (5) | |||||
Matching_cDNA (7) | |||||
RNAi_result (5) | |||||
WB_RNAi_result (10) | |||||
GO_term (5) | |||||
Variation (5) | |||||
Microarray_results | SMD_C06G4.2 | ||||
SMD_C06G4.3 | |||||
174918_at | |||||
Remark | this isoform is based on EMBL accession BJ102973 | ||||
Method | curated |