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CDS: C07A12.1a
| C07A12.1a | SMap | S_parent | Sequence | C07A12 | |
|---|---|---|---|---|---|
| Structure | Source_exons (7) | ||||
| DB_info | Database | TREMBL | Q95QX3_CAEEL | ||
| TrEMBL_AC | Q95QX3 | ||||
| NDB | GI_number | 16041609 | |||
| Protein_id | C07A12 | AAK39155 | 2 | ||
| DB_remark | C. elegans HAM-2 protein; contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type)contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | EMBL | CEK082HYF | ||
| Visible | Gene | C07A12.1 | |||
| Corresponding_transcript | C07A12.1a | ||||
| Corresponding_protein | WP:CE29567 | ||||
| Corresponding_PCR_product | cenix:82-h1 | ||||
| mv_C07A12.1 | |||||
| sjj_C07A12.1 | |||||
| smd_C07A12.1:2 | |||||
| Corresponding_RNAi_reagent | Cenix:82-h1 | ||||
| sjj_C07A12.1 | |||||
| Matching_cDNA | CK581265 | Inferred_automatically | transcript_builder.pl | ||
| yk82h11.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:82-h1 | ||||
| JA:C07A12.1 | |||||
| WB_RNAi_result | JA:C07A12.1 | ||||
| MV_SV:mv_C07A12.1 | |||||
| Cenix:82-h1 | |||||
| GO_term | GO:0003676 | IEA | Inferred_automatically | ||
| GO:0008270 | IEA | Inferred_automatically | |||
| GO:0005634 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_C07A12.1 | ||||
| SMD_C07A12.1:2 | |||||
| 190176_at | |||||
| Aff_C07A12.1 | |||||
| Brief_identification | zinc finger protein | ||||
| Y2H_target | Y2H009588 | ||||
| Remark | originally predicted to be two genes by genefinder, however the EST yk82h11 suggests it should be one. | ||||
| the splice acceptor site in the 2nd intron (43495) was changed based on EST data - 20000312 - js | |||||
| modified one exon based on EST data 011008 db | |||||
| this isoform is based on EMBL accession CEK082HYF | |||||
| Method | curated |
