Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: C08G9.2   

C08G9.2SMapS_parentSequenceC08G9
Structure Source_exons (26)
DB_info Database TREMBL O44131_CAEEL
TrEMBL_AC O44131
NDB GI_number 20976709
Protein_idC08G9 AAB883112
DB_remarkcontains similarity to Pfam domains PF02822 (Antistasin family)(6), PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF00095 (WAP-type (Whey Acidic Protein) 'four-disulfide core')(8), PF00086 (Thyroglobulin type-1 repeat)(6)contains similarity to Interpro domains IPR006150 (Worm-specific repeat type 1), IPR000716 (Thyroglobulin type-1), IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR008197 (Whey acidic protein, core region), IPR004094 (Proteinase inhibitor I15, antistasin), IPR006209 (EGF-like), IPR007087 (Zinc finger, C2H2-type), IPR003645 (Follistatin-like, N-terminal)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneC08G9.2
Corresponding_transcriptC08G9.2
Corresponding_proteinWP:CE24793
Corresponding_PCR_product cenix:137-c7
mv_C08G9.2
sjj_C08G9.2
Corresponding_RNAi_reagent Cenix:137-c7
sjj_C08G9.2
Matching_cDNA yk2e7.5 Inferred_automaticallytranscript_builder.pl
CK590445 Inferred_automaticallytranscript_builder.pl
OSTR151D3_1 Inferred_automaticallytranscript_builder.pl
RNAi_result Cenix:137-c7
JA:C08G9.2
WB_RNAi_result JA:C08G9.2
MV_SV:mv_C08G9.2
Cenix:137-c7
GO_term GO:0004867 IEA Inferred_automatically
GO:0003676 IEA Inferred_automatically
GO:0008270 IEA Inferred_automatically
GO:0005634 IEA Inferred_automatically
VariationcxP10220
Microarray_results SMD_C08G9.2
180861_at
Aff_C08G9.2
Y2H_targetY2H005309
Remarkthe first two exons were added based on BLASTN similarity with C. briggsae-20000112-js
Methodcurated