CDS: C08G9.2
C08G9.2 | SMap | S_parent | Sequence | C08G9 | |
---|---|---|---|---|---|
Structure | Source_exons (26) | ||||
DB_info | Database | TREMBL | O44131_CAEEL | ||
TrEMBL_AC | O44131 | ||||
NDB | GI_number | 20976709 | |||
Protein_id | C08G9 | AAB88311 | 2 | ||
DB_remark | contains similarity to Pfam domains PF02822 (Antistasin family)(6), PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF00095 (WAP-type (Whey Acidic Protein) 'four-disulfide core')(8), PF00086 (Thyroglobulin type-1 repeat)(6)contains similarity to Interpro domains IPR006150 (Worm-specific repeat type 1), IPR000716 (Thyroglobulin type-1), IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR008197 (Whey acidic protein, core region), IPR004094 (Proteinase inhibitor I15, antistasin), IPR006209 (EGF-like), IPR007087 (Zinc finger, C2H2-type), IPR003645 (Follistatin-like, N-terminal) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | C08G9.2 | |||
Corresponding_transcript | C08G9.2 | ||||
Corresponding_protein | WP:CE24793 | ||||
Corresponding_PCR_product | cenix:137-c7 | ||||
mv_C08G9.2 | |||||
sjj_C08G9.2 | |||||
Corresponding_RNAi_reagent | Cenix:137-c7 | ||||
sjj_C08G9.2 | |||||
Matching_cDNA | yk2e7.5 | Inferred_automatically | transcript_builder.pl | ||
CK590445 | Inferred_automatically | transcript_builder.pl | |||
OSTR151D3_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:137-c7 | ||||
JA:C08G9.2 | |||||
WB_RNAi_result | JA:C08G9.2 | ||||
MV_SV:mv_C08G9.2 | |||||
Cenix:137-c7 | |||||
GO_term | GO:0004867 | IEA | Inferred_automatically | ||
GO:0003676 | IEA | Inferred_automatically | |||
GO:0008270 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
Variation | cxP10220 | ||||
Microarray_results | SMD_C08G9.2 | ||||
180861_at | |||||
Aff_C08G9.2 | |||||
Y2H_target | Y2H005309 | ||||
Remark | the first two exons were added based on BLASTN similarity with C. briggsae-20000112-js | ||||
Method | curated |