RNAiDB Tree View

CDS: C09D1.1c

C09D1.1c	SMap	S_parent	Sequence	C09D1
	Structure	Source_exons (14)
	DB_info	Database	SwissProt	SwissProt_ID	UNC89_CAEEL
				SwissProt_AC	O01761
			NDB	GI_number	31746684
		Protein_id	C09D1	AAP68959	1
		DB_remark	C. elegans UNC-89 protein; contains similarity to Pfam domains PF00047 (Immunoglobulin domain), PF07679 (Immunoglobulin I-set domain), PF00041 (Fibronectin type III domain), PF00069 (Protein kinase domain)(2)contains similarity to Interpro domains IPR003598 (Immunoglobulin C2 type), IPR011511 (Variant SH3), IPR007110 (Immunoglobulin-like), IPR003006 (Immunoglobulin/major histocompatibility complex), IPR000219 (DH), IPR003961 (Fibronectin, type III), IPR004168 (PPAK motif), IPR001849 (Pleckstrin-like), IPR009134 (Vascular endothelial growth factor receptor, VEGFR), IPR001452 (SH3), IPR000719 (Protein kinase), IPR011993 (Pleckstrin homology-type), IPR007850 (RCSD)
	Origin	From_laboratory	RW
		Species	Caenorhabditis elegans
	Properties	Coding	CDS
			Prediction_status	Confirmed
		Isoform	Accession_evidence	EMBL	CB388071
	Visible	Gene	C09D1.1
		Corresponding_transcript	C09D1.1c
		Corresponding_protein	WP:CE34252
		Corresponding_PCR_product	cenix:22-e8
			mv_C24G7.5
			sjj_C24G7.5
		Corresponding_RNAi_reagent	Cenix:22-e8
			sjj_C24G7.5
		Matching_cDNA	AY724772	Inferred_automatically	transcript_builder.pl
			OSTF091E10_1	Inferred_automatically	transcript_builder.pl
		RNAi_result	Cenix:22-e8
			JA:C24G7.5
		WB_RNAi_result	JA:C24G7.5
			MV_SV:mv_C24G7.5
			WBRNAi00038533
			Cenix:22-e8
		GO_term (6)
		Variation	tm752
		Microarray_results	SMD_C24G7.5
			189196_at
			Aff_C24G7.5
		Brief_identification	Protein kinase
		Remark	[20030611 db] this used to be C24G7.5
			modified 5' exon based on OST data(OSTF091E10_1) [20030602 po]
			this isoform is based on EMBL accession CB388071
	Method	curated