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CDS: C09G5.5   

C09G5.5SMapS_parentSequenceC09G5
Structure Source_exons 1138
1861001
DB_info Database SwissProt SwissProt_ID YQ35_CAEEL
SwissProt_AC Q09456
NDB GI_number 3874102
NCBI RefSeq NM_063909
Protein_idC09G5 CAA867581
DB_remarkC. elegans COL-80 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
Visible GeneC09G5.5
Corresponding_transcriptC09G5.5
Corresponding_proteinWP:CE01485
Corresponding_PCR_product cenix:230-c3
mv_C09G5.2
mv_C09G5.5
sjj_C09G5.5
Corresponding_RNAi_reagent Cenix:230-c3
sjj_C09G5.5
Matching_cDNA (12)
RNAi_result Cenix:230-c3
JA:C09G5.5
WB_RNAi_result (6)
GO_term GO:0042302 IEA Inferred_automatically
GO:0006817 IEA Inferred_automatically
GO:0005737 IEA Inferred_automatically
Microarray_results SMD_C09G5.5
188622_at
Aff_C09G5.5
Brief_identificationcollagen
Y2H_targetY2H008176
Remark 71% identical to C09G5.4
34% identical to C09G5.3
Methodcurated