CDS: C09G5.6
C09G5.6 | SMap | S_parent | Sequence | C09G5 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 144 | ||
191 | 464 | ||||
510 | 2632 | ||||
2682 | 2787 | ||||
2835 | 3034 | ||||
DB_info | Database | SwissProt | SwissProt_ID | BLI1_CAEEL | |
SwissProt_AC | Q09457 | ||||
NDB | GI_number | 37619788 | |||
NCBI | RefSeq | NM_063910 | |||
Protein_id | C09G5 | CAA86755 | 2 | ||
DB_remark | C. elegans BLI-1 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | C09G5.6 | |||
Corresponding_transcript | C09G5.6 | ||||
Corresponding_protein | WP:CE35827 | ||||
Corresponding_PCR_product (7) | |||||
Corresponding_RNAi_reagent | Cenix:157-g8 | ||||
Cenix:165-f3 | |||||
sjj_C09G5.6 | |||||
TH:218-f8 | |||||
Matching_cDNA (9) | |||||
RNAi_result (5) | |||||
WB_RNAi_result (7) | |||||
GO_term (7) | |||||
Microarray_results (5) | |||||
Brief_identification | collagen | ||||
Remark | [031001 pad] gene prediction altered to follow OST data. Intron inserted into 5' end of exon 2. | ||||
Associated_feature | WBsf015138 | ||||
Method | curated |