CDS: C12D8.8
C12D8.8 | SMap | S_parent | Sequence | C12D8 | |
---|---|---|---|---|---|
Structure | Source_exons (2) | ||||
DB_info | Database | TREMBL | Q17939_CAEEL | ||
TrEMBL_AC | Q17939 | ||||
NDB | GI_number | 3874258 | |||
NCBI | RefSeq | NM_073234 | |||
Protein_id | C12D8 | CAA98236 | 1 | ||
DB_remark | C. elegans COL-148 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | C12D8.8 | |||
Corresponding_transcript | C12D8.8 | ||||
Corresponding_protein | WP:CE05271 | ||||
Corresponding_PCR_product | cenix:226-f5 | ||||
mv_C12D8.8 | |||||
sjj_C12D8.8 | |||||
Corresponding_RNAi_reagent | Cenix:226-f5 | ||||
sjj_C12D8.8 | |||||
Matching_cDNA | OSTF168G11_1 | Inferred_automatically | transcript_builder.pl | ||
OSTR168G11_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:226-f5 | ||||
JA:C12D8.8 | |||||
WB_RNAi_result | JA:C12D8.8 | ||||
MV_SV:mv_C12D8.8 | |||||
Cenix:226-f5 | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Variation | uCE5-1808 | ||||
Microarray_results | SMD_C12D8.8 | ||||
188301_at | |||||
190073_at | |||||
Aff_C12D8.8 | |||||
Brief_identification | collagen | ||||
Method | curated |