CDS: C26C6.1a
C26C6.1a | SMap | S_parent | Sequence | SUPERLINK_CB_I | |
---|---|---|---|---|---|
Structure | Source_exons (15) | ||||
DB_info | Database | TREMBL | Q18210_CAEEL | ||
TrEMBL_AC | Q18210 | ||||
NDB | GI_number | 19171244 | |||
Protein_id | C26C6 | CAA96600 | 2 | ||
T28F4 | CAA96697 | 2 | |||
DB_remark | C. elegans TAG-185 protein; contains similarity to Pfam domains PF00439 (Bromodomain)(5), PF00505 (HMG (high mobility group) box), PF00096 (Zinc finger, C2H2 type), PF01426 (BAH domain)(2)contains similarity to Interpro domains IPR001487 (Bromodomain), IPR001025 (Bromo adjacent region), IPR007087 (Zinc finger, C2H2-type), IPR000910 (HMG1/2 (high mobility group) box) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | NDB | BJ113906 | ||
Visible | Gene | C26C6.1 | |||
Corresponding_transcript | C26C6.1a | ||||
Corresponding_protein | WP:CE30254 | ||||
Corresponding_PCR_product | cenix:55-c5 | ||||
sjj_C26C6.1 | |||||
mv_C26C6.1 | |||||
smd_C26C6.1:2 | |||||
Corresponding_RNAi_reagent | Cenix:55-c5 | ||||
sjj_C26C6.1 | |||||
Matching_cDNA (58) | |||||
RNAi_result | JA:C26C6.1 | ||||
Simmer:C26C6.1:Screen_A | |||||
Simmer:C26C6.1:Screen_B | |||||
Cenix:55-c5 | |||||
WB_RNAi_result | JA:C26C6.1 | ||||
Simmer:C26C6.1:Screen_A | |||||
Simmer:C26C6.1:Screen_B | |||||
Cenix:55-c5 | |||||
GO_term (11) | |||||
Variation | tm415 | ||||
Microarray_results | SMD_C26C6.1 | ||||
SMD_C26C6.1:2 | |||||
194061_s_at | |||||
Aff_C26C6.1 | |||||
Brief_identification | HMG (high mobility group) box, Bromodomain (5 domains), Zinc finger, C2H2 type | ||||
Remark | 960426: Contains the Bromodomain signature (PS00633) | ||||
Annotated using Pfam | |||||
[020121 dl] Modified prediction based on EST yk826e04. Use altetnate splice donor for intron [5784..5854] | |||||
Associated_feature | WBsf004327 | ||||
Method | curated |