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CDS: C27A12.5
| C27A12.5 | SMap | S_parent | Sequence | C27A12 | |
|---|---|---|---|---|---|
| Structure | Source_exons (5) | ||||
| DB_info | Database | TREMBL | O01962_CAEEL | ||
| TrEMBL_AC | O01962 | ||||
| NDB | GI_number | 4895095 | |||
| NCBI | RefSeq | NM_059345 | |||
| Protein_id | C27A12 | AAB93639 | 2 | ||
| DB_remark | C. elegans CEH-2 protein; contains similarity to Pfam domain PF00046 (Homeobox domain)contains similarity to Interpro domains IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR001356 (Homeobox), IPR012287 (Homeodomain-related) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | C27A12.5 | |||
| Corresponding_transcript | C27A12.5 | ||||
| Corresponding_protein | WP:CE20530 | ||||
| Corresponding_PCR_product | cenix:77-f10 | ||||
| mv_C27A12.5 | |||||
| sjj_C27A12.5 | |||||
| Corresponding_RNAi_reagent | Cenix:77-f10 | ||||
| sjj_C27A12.5 | |||||
| Matching_cDNA | AY246429 | Inferred_automatically | transcript_builder.pl | ||
| OSTF074C2_1 | Inferred_automatically | transcript_builder.pl | |||
| AY246428 | Inferred_automatically | transcript_builder.pl | |||
| OSTR074C2_1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:77-f10 | ||||
| JA:C27A12.5 | |||||
| WB_RNAi_result | JA:C27A12.5 | ||||
| MV_SV:mv_C27A12.5 | |||||
| Cenix:77-f10 | |||||
| GO_term (5) | |||||
| Variation | ch4 | ||||
| tm270 | |||||
| Microarray_results | SMD_C27A12.5 | ||||
| 191750_at | |||||
| Aff_C27A12.5 | |||||
| Brief_identification | Homeobox protein | ||||
| Remark | 980226-added locus based on note from Thomas Burglin-js | ||||
| 981104-4th exon was deleted based on disruption of the homeobox similarity pointed out by J.Spring-js | |||||
| Method | curated |
