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CDS: C30F2.1
| C30F2.1 | SMap | S_parent | Sequence | C30F2 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 153 | ||
| 279 | 741 | ||||
| 1595 | 1699 | ||||
| 1748 | 1950 | ||||
| DB_info | Database | TREMBL | Q18327_CAEEL | ||
| TrEMBL_AC | Q18327 | ||||
| NDB | GI_number | 3874534 | |||
| NCBI | RefSeq | NM_078229 | |||
| Protein_id | C30F2 | CAA94580 | 1 | ||
| DB_remark | C. elegans COL-187 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | C30F2.1 | |||
| Corresponding_transcript | C30F2.1 | ||||
| Corresponding_protein | WP:CE17480 | ||||
| Corresponding_PCR_product | cenix:57-h9 | ||||
| mv_C30F2.1 | |||||
| sjj_C30F2.1 | |||||
| Corresponding_RNAi_reagent | Cenix:57-h9 | ||||
| sjj_C30F2.1 | |||||
| Matching_cDNA | OSTF219C2_1 | Inferred_automatically | transcript_builder.pl | ||
| OSTR219C2_1 | Inferred_automatically | transcript_builder.pl | |||
| yk265h8.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:57-h9 | ||||
| JA:C30F2.1 | |||||
| WB_RNAi_result | SA:yk265h8 | ||||
| JA:C30F2.1 | |||||
| MV_SV:mv_C30F2.1 | |||||
| Cenix:57-h9 | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Variation | uCE6-1607 | ||||
| Microarray_results | SMD_C30F2.1 | ||||
| 188293_at | |||||
| Aff_C30F2.1 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
