CDS: C30F2.1
C30F2.1 | SMap | S_parent | Sequence | C30F2 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 153 | ||
279 | 741 | ||||
1595 | 1699 | ||||
1748 | 1950 | ||||
DB_info | Database | TREMBL | Q18327_CAEEL | ||
TrEMBL_AC | Q18327 | ||||
NDB | GI_number | 3874534 | |||
NCBI | RefSeq | NM_078229 | |||
Protein_id | C30F2 | CAA94580 | 1 | ||
DB_remark | C. elegans COL-187 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | C30F2.1 | |||
Corresponding_transcript | C30F2.1 | ||||
Corresponding_protein | WP:CE17480 | ||||
Corresponding_PCR_product | cenix:57-h9 | ||||
mv_C30F2.1 | |||||
sjj_C30F2.1 | |||||
Corresponding_RNAi_reagent (2) | |||||
Matching_cDNA | OSTF219C2_1 | Inferred_automatically | transcript_builder.pl | ||
OSTR219C2_1 | Inferred_automatically | transcript_builder.pl | |||
yk265h8.3 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:57-h9 | ||||
JA:C30F2.1 | |||||
WB_RNAi_result | SA:yk265h8 | ||||
JA:C30F2.1 | |||||
MV_SV:mv_C30F2.1 | |||||
Cenix:57-h9 | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Variation | uCE6-1607 | ||||
Microarray_results | SMD_C30F2.1 | ||||
188293_at | |||||
Aff_C30F2.1 | |||||
Brief_identification | collagen | ||||
Method | curated |