CDS: C36B1.1a
C36B1.1a | SMap | S_parent | Sequence | SUPERLINK_CB_I | |
---|---|---|---|---|---|
Structure | Source_exons (21) | ||||
DB_info | Database | TREMBL | Q7JL30_CAEEL | ||
TrEMBL_AC | Q7JL30 | ||||
NDB | GI_number | 51591867 | |||
NCBI | RefSeq | NM_170904 | |||
Protein_id | F39H11 | CAD21644 | 2 | ||
C36B1 | CAD21701 | 2 | |||
DB_remark | C. elegans CLE-1 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies))(2), PF06482 (Collagenase NC10 and Endostatin), PF00041 (Fibronectin type III domain)(2)contains similarity to Interpro domains IPR010515 (Collagenase NC10 and endostatin), IPR003961 (Fibronectin, type III), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | NDB | BJ763045 | ||
Visible | Gene | C36B1.1 | |||
Corresponding_transcript | C36B1.1a | ||||
Corresponding_protein | WP:CE36988 | ||||
Corresponding_PCR_product (11) | |||||
Corresponding_RNAi_reagent | Cenix:11-f8 | ||||
Cenix:84-b1 | |||||
Cenix:84-e2 | |||||
sjj_C36B1.1 | |||||
sjj_C36B1.2 | |||||
sjj_F39H11.4 | |||||
RNAi_result (6) | |||||
WB_RNAi_result (8) | |||||
GO_term (6) | |||||
Variation | gk364 | ||||
gk390 | |||||
gk421 | |||||
tm1465 | |||||
Microarray_results (9) | |||||
Brief_identification | cle-1 isoform A | ||||
Remark | [010615 kj] C36B1.1 and F39H11.4 merged due to EST evidence | ||||
[011107 kj] Merged with C36B1.2 and isoforms added according to AF164959 (protein id AAD47823.1) | |||||
[040708 ar2] Extended exon based on OSTR081H9_1 | |||||
Method | curated |