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CDS: C36B1.1b
| C36B1.1b | SMap | S_parent | Sequence | SUPERLINK_CB_I | |
|---|---|---|---|---|---|
| Structure | Source_exons (15) | ||||
| DB_info | Database | TREMBL | Q9U9K6_CAEEL | ||
| TrEMBL_AC | Q9U9K6 | ||||
| NDB | GI_number | 18376513 | |||
| NCBI | RefSeq | NM_170905 | |||
| Protein_id | F39H11 | CAD21643 | 1 | ||
| C36B1 | CAD21700 | 1 | |||
| DB_remark | C. elegans CLE-1 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies))(2), PF06482 (Collagenase NC10 and Endostatin)contains similarity to Interpro domains IPR010515 (Collagenase NC10 and endostatin), IPR003129 (Laminin G, Thrombospondin-type, N terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | NDB | C61305 | ||
| Visible | Gene | C36B1.1 | |||
| Corresponding_transcript | C36B1.1b | ||||
| Corresponding_protein | WP:CE29706 | ||||
| Corresponding_PCR_product (8) | |||||
| Corresponding_RNAi_reagent | Cenix:11-f8 | ||||
| Cenix:84-e2 | |||||
| sjj_C36B1.1 | |||||
| sjj_F39H11.4 | |||||
| Matching_cDNA | yk1594h03.5 | Inferred_automatically | transcript_builder.pl | ||
| OSTF022H5_1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:11-f8 | ||||
| Cenix:84-e2 | |||||
| JA:C36B1.1 | |||||
| JA:F39H11.4 | |||||
| WB_RNAi_result | SA:yk297a9 | ||||
| JA:C36B1.1 | |||||
| JA:F39H11.4 | |||||
| MV_SV:mv_AAD47824 | |||||
| Cenix:11-f8 | |||||
| Cenix:84-e2 | |||||
| GO_term (6) | |||||
| Microarray_results (6) | |||||
| Brief_identification | cle-1 isoform B | ||||
| Remark | [010615 kj] C36B1.1 and F39H11.4 merged due to EST evidence | ||||
| [011107 kj] Changed into C36B1.1b according to AF164959 (protein id AAD47824.1) | |||||
| Method | curated |
