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CDS: C36B1.1c
| C36B1.1c | SMap | S_parent | Sequence | F39H11 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 327 | ||
| 899 | 1031 | ||||
| 1553 | 2161 | ||||
| 2537 | 2727 | ||||
| 3397 | 3528 | ||||
| 3578 | 3882 | ||||
| 4555 | 4637 | ||||
| 4687 | 4790 | ||||
| 4902 | 4970 | ||||
| DB_info | Database | TREMBL | O17866_CAEEL | ||
| TrEMBL_AC | O17866 | ||||
| NDB | GI_number | 3877036 | |||
| NCBI | RefSeq | NM_170906 | |||
| Protein_id | F39H11 | CAB03084 | 1 | ||
| DB_remark | C. elegans CLE-1 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies))(2), PF06482 (Collagenase NC10 and Endostatin)contains similarity to Interpro domains IPR010515 (Collagenase NC10 and endostatin), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | NDB | Z14325 | ||
| Visible | Gene | C36B1.1 | |||
| Corresponding_transcript | C36B1.1c | ||||
| Corresponding_protein | WP:CE17816 | ||||
| Corresponding_PCR_product (5) | |||||
| Corresponding_RNAi_reagent | Cenix:11-f8 | ||||
| sjj_F39H11.4 | |||||
| Matching_cDNA (13) | |||||
| RNAi_result | Cenix:11-f8 | ||||
| JA:F39H11.4 | |||||
| WB_RNAi_result | SA:yk297a9 | ||||
| JA:F39H11.4 | |||||
| MV_SV:mv_AAD47824 | |||||
| Cenix:11-f8 | |||||
| GO_term (6) | |||||
| Microarray_results | SMD_F39H11.4 | ||||
| 188401_s_at | |||||
| Aff_F39H11.4 | |||||
| Brief_identification | cle-1 isoform C | ||||
| Remark | [010615 kj] C36B1.1 and F39H11.4 merged due to EST evidence | ||||
| [011107 kj] Added according to AF164959 (protein id AAD47825.1) | |||||
| Associated_feature | WBsf000322 | ||||
| Method | curated |
