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CDS: C39E9.3
| C39E9.3 | SMap | S_parent | Sequence | C39E9 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 132 | ||
| 175 | 343 | ||||
| 842 | 1398 | ||||
| 1455 | 1523 | ||||
| DB_info | Database | TREMBL | Q18537_CAEEL | ||
| TrEMBL_AC | Q18537 | ||||
| NDB | GI_number | 3874838 | |||
| NCBI | RefSeq | NM_070106 | |||
| Protein_id | C39E9 | CAA94329 | 1 | ||
| DB_remark | C. elegans COL-131 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | C39E9.3 | |||
| Corresponding_transcript | C39E9.3 | ||||
| Corresponding_protein | WP:CE05386 | ||||
| Corresponding_PCR_product | cenix:243-g7 | ||||
| mv_C39E9.3 | |||||
| sjj_C39E9.3 | |||||
| Corresponding_RNAi_reagent | Cenix:243-g7 | ||||
| sjj_C39E9.3 | |||||
| Matching_cDNA | OSTF146D10_1 | Inferred_automatically | transcript_builder.pl | ||
| yk185h4.5 | Inferred_automatically | transcript_builder.pl | |||
| OSTR146D10_1 | Inferred_automatically | transcript_builder.pl | |||
| yk185h4.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:243-g7 | ||||
| JA:C39E9.3 | |||||
| WB_RNAi_result | SA:yk185h4 | ||||
| JA:C39E9.3 | |||||
| MV_SV:mv_C39E9.3 | |||||
| Cenix:243-g7 | |||||
| GO_term (6) | |||||
| Microarray_results | SMD_C39E9.3 | ||||
| 188331_s_at | |||||
| 188365_at | |||||
| Aff_C39E9.3 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
