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CDS: C45E5.6a
| C45E5.6a | SMap | S_parent | Sequence | C45E5 | |
|---|---|---|---|---|---|
| Structure | Source_exons (6) | ||||
| DB_info | Database | TREMBL | Q18646_CAEEL | ||
| TrEMBL_AC | Q18646 | ||||
| NDB | GI_number | 1397302 | |||
| Protein_id | C45E5 | AAC24291 | 1 | ||
| DB_remark | C. elegans NHR-46 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding), IPR001723 (Steroid hormone receptor) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | AF273790 | ||
| Visible | Gene | C45E5.6 | |||
| Corresponding_transcript | C45E5.6a.1 | ||||
| C45E5.6a.2 | |||||
| Corresponding_protein | WP:CE08734 | ||||
| Corresponding_PCR_product | cenix:19-b9 | ||||
| mv_C45E5.6 | |||||
| sjj_C45E5.6 | |||||
| Matching_cDNA (28) | |||||
| WB_RNAi_result | JA:C45E5.6 | ||||
| MV_SV:mv_C45E5.6 | |||||
| Cenix:19-b9 | |||||
| GO_term (6) | |||||
| Microarray_results | SMD_C45E5.6 | ||||
| 192835_at | |||||
| Aff_C45E5.6 | |||||
| Brief_identification | nuclear hormone receptor | ||||
| Y2H_target (10) | |||||
| Remark | the ESTs yk5b9.5 and yk82e1.5 define an unconventional 5' splice site (gt) in the first intron | ||||
| this isoform is based on EMBL accession AF273790 | |||||
| Associated_feature | WBsf002305 | ||||
| Method | curated |
