CDS: C46A5.3
C46A5.3 | SMap | S_parent | Sequence | C46A5 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 53 | ||
111 | 386 | ||||
497 | 1205 | ||||
DB_info | Database | SwissProt | SwissProt_ID | COL14_CAEEL | |
SwissProt_AC | P18834 | ||||
NDB | GI_number | 20976712 | |||
NCBI | RefSeq | NM_068872 | |||
Protein_id | C46A5 | AAB03143 | 2 | ||
DB_remark | C. elegans COL-14 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding (2) | ||||
Visible | Gene | C46A5.3 | |||
Corresponding_transcript | C46A5.3 | ||||
Corresponding_protein | WP:CE29723 | ||||
Corresponding_PCR_product (5) | |||||
Corresponding_RNAi_reagent | Cenix:128-e9 | ||||
Cenix:174-a1 | |||||
sjj_C46A5.3 | |||||
Matching_cDNA (10) | |||||
RNAi_result (5) | |||||
WB_RNAi_result (6) | |||||
GO_term | GO:0040035 | IMP | Inferred_automatically | ||
GO:0042302 | IEA | Inferred_automatically | |||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results | SMD_C46A5.3 | ||||
Brief_identification | cuticular collagen | ||||
Remark | this differs from col-14 by only one amino acid | ||||
modified N-terminus based on EST data 011015 db | |||||
Method | curated |