Gene: C47D12.6
C47D12.6 | SMap | S_parent | Sequence | C47D12 | ||
---|---|---|---|---|---|---|
Chromosome | II | |||||
Identity (5) | ||||||
Gene_info | Gene_class | trs | ||||
Allele | uCE2-2024 | |||||
GO_term | GO:0004812 | IEA | Inferred_automatically | |||
GO:0005524 | IEA | Inferred_automatically | ||||
GO:0006412 | IEA | Inferred_automatically | ||||
GO:0005489 | IEA | Inferred_automatically | ||||
GO:0005506 | IEA | Inferred_automatically | ||||
GO:0006118 | IEA | Inferred_automatically | ||||
GO:0006418 | IEA | Inferred_automatically | ||||
GO:0004829 | IEA | Inferred_automatically | ||||
GO:0006435 | IEA | Inferred_automatically | ||||
GO:0004185 | IEA | Inferred_automatically | ||||
GO:0006508 | IEA | Inferred_automatically | ||||
Structured_description | Provisional_description | This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. | Paper_evidence | WBPaper00004424 | ||
Person_evidence | WBPerson567 | |||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Proteins localized to a given organelle by experiments tend to share a characteristic phylogenetic distribution of their homologs, called a phylogenetic profile. | ||||||
For instance, mitochondrial proteins can be identified effectively by their phylogenetic profiles. | ||||||
By applying phylogenetic profile analysis to the C. elegans genome, Eisenberg and coworkers inferred that this gene, along with 2-4% of all the nuclear genes in C. elegans, encodes a mitochondrial protein. | ||||||
The large fraction of organism-specific and eukaryote-derived genes suggests that C. elegans mitochondria perform specialized roles absent from prokaryotic mitochondrial ancestors. | ||||||
Concise_description | This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. | |||||
Molecular_info | Corresponding_CDS | C47D12.6a | ||||
C47D12.6b | ||||||
Corresponding_CDS_history | C47D12.6:wp99 | |||||
Corresponding_protein | WP:CE05434 | |||||
WP:CE33765 | ||||||
Corresponding_PCR_product | sjj_C47D12.6 | |||||
Corresponding_RNAi_reagent (5) | ||||||
Experimental_info | RNAi_result (3) | |||||
WB_RNAi_result (6) | ||||||
Y2H_target | Y2H007239 | |||||
Y2H009820 | ||||||
Reference (2) | ||||||
Method | Gene |