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CDS: C48G7.3
| C48G7.3 | SMap | S_parent | Sequence | SUPERLINK_CB_V | |
|---|---|---|---|---|---|
| Structure | Source_exons (5) | ||||
| DB_info | Database | TREMBL | Q9TVM3_CAEEL | ||
| TrEMBL_AC | Q9TVM3 | ||||
| NDB | GI_number | 6425356 | |||
| Protein_id | C48G7 | CAB60286 | 1 | ||
| Y50E8A | CAB60587 | 1 | |||
| DB_remark | C. elegans TAG-333 protein; contains similarity to Pfam domains PF02204 (Vacuolar sorting protein 9 (VPS9) domain), PF00788 (Ras association (RalGDS/AF-6) domain)contains similarity to Interpro domains IPR003123 (Vacuolar sorting protein 9), IPR000159 (RA) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | C48G7.3 | |||
| Corresponding_transcript | C48G7.3 | ||||
| Corresponding_protein | WP:CE23604 | ||||
| Corresponding_PCR_product | cenix:36-e2 | ||||
| mv_C48G7.3 | |||||
| sjj_Y50E8.r | |||||
| Corresponding_RNAi_reagent | Cenix:36-e2 | ||||
| sjj_Y50E8.r | |||||
| Matching_cDNA | yk578g4.5 | Inferred_automatically | transcript_builder.pl | ||
| yk277e5.5 | Inferred_automatically | transcript_builder.pl | |||
| yk495d8.5 | Inferred_automatically | transcript_builder.pl | |||
| OSTF189A5_1 | Inferred_automatically | transcript_builder.pl | |||
| yk900g02.3 | Inferred_automatically | transcript_builder.pl | |||
| yk280g6.3 | Inferred_automatically | transcript_builder.pl | |||
| yk257c8.3 | Inferred_automatically | transcript_builder.pl | |||
| yk42d1.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1292d08.5 | Inferred_automatically | transcript_builder.pl | |||
| yk280g6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk41f3.5 | Inferred_automatically | transcript_builder.pl | |||
| yk557g6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1085d11.5 | Inferred_automatically | transcript_builder.pl | |||
| yk859c03.3 | Inferred_automatically | transcript_builder.pl | |||
| yk870c11.3 | Inferred_automatically | transcript_builder.pl | |||
| yk41f3.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1292d08.3 | Inferred_automatically | transcript_builder.pl | |||
| yk900g02.5 | Inferred_automatically | transcript_builder.pl | |||
| OSTF189A5_2 | Inferred_automatically | transcript_builder.pl | |||
| yk1387c12.3 | Inferred_automatically | transcript_builder.pl | |||
| yk503g4.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1085d11.3 | Inferred_automatically | transcript_builder.pl | |||
| yk342g12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1231a05.3 | Inferred_automatically | transcript_builder.pl | |||
| OSTR189A5_1 | Inferred_automatically | transcript_builder.pl | |||
| yk4e7.3 | Inferred_automatically | transcript_builder.pl | |||
| yk578g4.3 | Inferred_automatically | transcript_builder.pl | |||
| yk7a4.3 | Inferred_automatically | transcript_builder.pl | |||
| yk277e5.3 | Inferred_automatically | transcript_builder.pl | |||
| yk209e3.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1208f04.3 | Inferred_automatically | transcript_builder.pl | |||
| yk29a11.5 | Inferred_automatically | transcript_builder.pl | |||
| yk503g4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk257c8.5 | Inferred_automatically | transcript_builder.pl | |||
| yk209e3.5 | Inferred_automatically | transcript_builder.pl | |||
| yk42d1.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1231a05.5 | Inferred_automatically | transcript_builder.pl | |||
| yk490a10.3 | Inferred_automatically | transcript_builder.pl | |||
| yk621f7.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:36-e2 | ||||
| JA:Y50E8.r | |||||
| WB_RNAi_result | JA:Y50E8.r | ||||
| MV_SV:mv_C48G7.3 | |||||
| Cenix:36-e2 | |||||
| GO_term | GO:0007165 | IEA | Inferred_automatically | ||
| Microarray_results | SMD_Y50E8.R | ||||
| Remark | [ms2 990809] built based on EST data, likely to be incomplete | ||||
| Method | curated |
