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CDS: C53B4.5
| C53B4.5 | SMap | S_parent | Sequence | C53B4 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 870 | ||
| DB_info | Database | TREMBL | Q18799_CAEEL | ||
| TrEMBL_AC | Q18799 | ||||
| NDB | GI_number | 3875169 | |||
| NCBI | RefSeq | NM_069160 | |||
| Protein_id | C53B4 | CAA92453 | 1 | ||
| DB_remark | C. elegans COL-119 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin (2) | |||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | C53B4.5 | |||
| Corresponding_transcript | C53B4.5 | ||||
| Corresponding_protein | WP:CE03091 | ||||
| Corresponding_PCR_product (5) | |||||
| Corresponding_RNAi_reagent | Cenix:182-g10 | ||||
| sjj_C53B4.5 | |||||
| Matching_cDNA (14) | |||||
| RNAi_result | Cenix:182-g10 | ||||
| JA:C53B4.5 | |||||
| [cgc5655]:C53B4.5 | |||||
| WB_RNAi_result | JA:C53B4.5 | ||||
| [cgc5655]:C53B4.5 | |||||
| MV_SV:mv_C53B4.5 | |||||
| Cenix:182-g10 | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_C53B4.5 | ||||
| 172698_x_at | |||||
| 173647_s_at | |||||
| Aff_C53B4.5 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
