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CDS: C54E10.5
| C54E10.5 | SMap | S_parent | Sequence | C54E10 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (7) | |||||
| DB_info | Database | TREMBL | O45315_CAEEL | |||
| TrEMBL_AC | O45315 | |||||
| NDB | GI_number | 50507800 | ||||
| Protein_id | C54E10 | CAB03998 | 2 | |||
| DB_remark | C. elegans NHR-170 protein; contains similarity to Pfam domain PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domain IPR001628 (Nuclear hormone receptor, DNA-binding) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | C54E10.5 | ||||
| Corresponding_transcript | C54E10.5 | |||||
| Corresponding_protein | WP:CE36429 | |||||
| Corresponding_PCR_product | cenix:135-c2 | |||||
| mv_C54E10.5 | ||||||
| sjj_C54E10.5 | ||||||
| smd_4C54E10.5 | ||||||
| Corresponding_RNAi_reagent | Cenix:135-c2 | |||||
| Cenix:213-d9 | ||||||
| sjj_C54E10.5 | ||||||
| Matching_cDNA | OSTR184C1_1 | Inferred_automatically | transcript_builder.pl | |||
| OSTF184C1_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | Cenix:135-c2 | |||||
| JA:C54E10.5 | ||||||
| WB_RNAi_result (6) | ||||||
| GO_term | GO:0003700 | IEA | Inferred_automatically | |||
| GO:0006355 | IEA | Inferred_automatically | ||||
| GO:0005634 | IEA | Inferred_automatically | ||||
| Variation | tm1658 | |||||
| Microarray_results | SMD_4C54E10.5 | |||||
| 192526_at | ||||||
| Aff_C54E10.5 | ||||||
| Brief_identification | Zinc finger, C4 type (two domains) | |||||
| Remark | Annotated using Pfam | |||||
| [040223 pad] Gene prediction altered to follow OST data, truncated the 5' end of the final exon. | Accession_evidence | NDB | CB397140 | |||
| Method | curated |
