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CDS: D2024.8
| D2024.8 | SMap | S_parent | Sequence | D2024 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 168 | ||
| 245 | 430 | ||||
| 480 | 666 | ||||
| 712 | 1136 | ||||
| DB_info | Database | TREMBL (2) | |||
| NDB | GI_number | 14574015 | |||
| NCBI | RefSeq | NM_068749 | |||
| Protein_id | D2024 | AAA82291 | 2 | ||
| DB_remark | C. elegans COL-114 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | D2024.8 | |||
| Corresponding_transcript | D2024.8 | ||||
| Corresponding_protein | WP:CE27897 | ||||
| Corresponding_PCR_product | cenix:125-a7 | ||||
| mv_D2024.8 | |||||
| sjj_D2024.8 | |||||
| Corresponding_RNAi_reagent | Cenix:125-a7 | ||||
| sjj_D2024.8 | |||||
| Matching_cDNA (5) | |||||
| RNAi_result (5) | |||||
| WB_RNAi_result (7) | |||||
| GO_term (7) | |||||
| Microarray_results | SMD_D2024.8 | ||||
| 189476_s_at | |||||
| Aff_D2024.8 | |||||
| Brief_identification | cuticle collagen | ||||
| Remark | changed the 5' splice site in the first intron based on EST data - 01-05-21 js | ||||
| Method | curated |
