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CDS: E03G2.3   

E03G2.3SMapS_parentSequenceE03G2
Structure Source_exons (7)
DB_info Database TREMBL Q27276_CAEEL
TrEMBL_AC Q27276
NDB GI_number 22267955
Protein_idE03G2 CAA921492
DB_remarkC. elegans MEC-5 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies))contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
Visible GeneE03G2.3
Corresponding_transcriptE03G2.3
Corresponding_proteinWP:CE31464
Corresponding_PCR_product cenix:121-f12
mv_AAA96504
sjj_E03G2.3
Corresponding_RNAi_reagent Cenix:121-f12
sjj_E03G2.3
Matching_cDNA (5)
RNAi_result Cenix:121-f12
JA:E03G2.3
WB_RNAi_result JA:E03G2.3
MV_SV:mv_AAA96504
Cenix:121-f12
GO_term GO:0006817 IEA Inferred_automatically
GO:0005737 IEA Inferred_automatically
Microarray_results (5)
Brief_identificationcollagen-like repeats
Remark [tsl] SL1 trans-spliced
[010517 dl] Modified prediction based on mRNA U33919. Added 2 internal exons
[010619 dl] Made into a pseudogene because of the internal stops. This is probably due to a sequencing error.
[020731 dl] Reinstated this as a real prediction after sequence correction
Associated_featureWBsf000245
Methodcurated