CDS: E03G2.3
E03G2.3 | SMap | S_parent | Sequence | E03G2 | |
---|---|---|---|---|---|
Structure | Source_exons (7) | ||||
DB_info | Database | TREMBL | Q27276_CAEEL | ||
TrEMBL_AC | Q27276 | ||||
NDB | GI_number | 22267955 | |||
Protein_id | E03G2 | CAA92149 | 2 | ||
DB_remark | C. elegans MEC-5 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies))contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | E03G2.3 | |||
Corresponding_transcript | E03G2.3 | ||||
Corresponding_protein | WP:CE31464 | ||||
Corresponding_PCR_product | cenix:121-f12 | ||||
mv_AAA96504 | |||||
sjj_E03G2.3 | |||||
Corresponding_RNAi_reagent | Cenix:121-f12 | ||||
sjj_E03G2.3 | |||||
Matching_cDNA (5) | |||||
RNAi_result | Cenix:121-f12 | ||||
JA:E03G2.3 | |||||
WB_RNAi_result | JA:E03G2.3 | ||||
MV_SV:mv_AAA96504 | |||||
Cenix:121-f12 | |||||
GO_term | GO:0006817 | IEA | Inferred_automatically | ||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results (5) | |||||
Brief_identification | collagen-like repeats | ||||
Remark | [tsl] SL1 trans-spliced | ||||
[010517 dl] Modified prediction based on mRNA U33919. Added 2 internal exons | |||||
[010619 dl] Made into a pseudogene because of the internal stops. This is probably due to a sequencing error. | |||||
[020731 dl] Reinstated this as a real prediction after sequence correction | |||||
Associated_feature | WBsf000245 | ||||
Method | curated |