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CDS: F01G12.5b   

F01G12.5bSMapS_parentSequenceF01G12
Structure Source_exons (18)
DB_info Database SwissProt SwissProt_ID CO4A2_CAEEL
SwissProt_AC P17140
NDB GI_number 1255877
NCBI RefSeq NM_078262
Protein_idF01G12 AAA962151
DB_remarkC. elegans LET-2 protein; contains similarity to Pfam domains PF01413 (C-terminal tandem repeated domain in type 4 procollagen)(2), PF01391 (Collagen triple helix repeat (20 copies))(22), PF07054 (Pericardin like repeat)(3)contains similarity to Interpro domains IPR009765 (Pericardin like), IPR008161 (Collagen helix repeat), IPR001442 (Type 4 procollagen, C-terminal repeat), IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
IsoformAccession_evidenceEMBL CAA80537.1
Visible GeneF01G12.5
Corresponding_transcript F01G12.5b.1
F01G12.5b.2
Corresponding_proteinWP:CE04335
Corresponding_PCR_product (5)
Matching_cDNA (47)
WB_RNAi_result (6)
GO_term (9)
Variation pkP6093
pkP6096
Microarray_results SMD_F01G12.5A
192923_s_at
Aff_F01G12.5A
Brief_identificationalpha-2 type IV collagen
Remarkthis isoform is based on EMBL accession CAA80537.1
Methodcurated