CDS: F10C2.6
F10C2.6 | SMap | S_parent | Sequence | F10C2 | |
---|---|---|---|---|---|
Structure | Source_exons (7) | ||||
DB_info | Database | TREMBL | P90831_CAEEL | ||
TrEMBL_AC | P90831 | ||||
NDB | GI_number | 24817292 | |||
NCBI | RefSeq | NM_073618 | |||
Protein_id | F10C2 | CAB04081 | 2 | ||
DB_remark | C. elegans DRS-2 protein; contains similarity to Pfam domains PF01336 (OB-fold nucleic acid binding domain), PF00152 (tRNA synthetases class II (D, K and N))contains similarity to Interpro domains IPR006195 (Aminoacyl-transfer RNA synthetase, class II), IPR004364 (tRNA synthetase, class II (D, K and N)), IPR004524 (Aspartyl-tRNA synthetase bacterial/mitochondrial type), IPR012340 (Nucleic acid-binding, OB-fold, subgroup), IPR004365 (nucleic acid binding, OB-fold, tRNA/helicase-type), IPR002312 (Aspartyl-tRNA synthetase, class IIb) | ||||
Origin (2) | |||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F10C2.6 | |||
Corresponding_transcript | F10C2.6 | ||||
Corresponding_protein | WP:CE31906 | ||||
Corresponding_PCR_product | cenix:160-a4 | ||||
mv_F10C2.6 | |||||
sjj_F10C2.6 | |||||
Corresponding_RNAi_reagent | Cenix:160-a4 | ||||
sjj_F10C2.6 | |||||
Matching_cDNA (8) | |||||
RNAi_result | JA:F10C2.6 | ||||
Cenix:160-a4 | |||||
WB_RNAi_result | SA:yk250e3 | ||||
JA:F10C2.6 | |||||
MV_SV:mv_F10C2.6 | |||||
Cenix:160-a4 | |||||
GO_term (8) | |||||
Microarray_results | SMD_F10C2.6 | ||||
190734_at | |||||
Aff_F10C2.6 | |||||
Brief_identification | Aspartyl-tRNA synthetase | ||||
Remark | [010618 kj] EST yk250e3 matches both F10C2.5 and .6 which seem to be co-transcribed (not merged due to different protein homologies) | ||||
[020920 dl] Modified prediction based on EST data. Added 5' exon and changed splice donor from exon 2 | |||||
[020920 dl] Discepency between yk856c02 and this prediction. Would make a truncated isoform/pseudogene | |||||
Associated_feature | WBsf014571 | ||||
Method | curated |