CDS: F14H3.11
F14H3.11 | SMap | S_parent | Sequence | F14H3 | |
---|---|---|---|---|---|
Structure | Source_exons (5) | ||||
DB_info | Database | TREMBL | O45365_CAEEL | ||
TrEMBL_AC | O45365 | ||||
NDB | GI_number | 34555900 | |||
Protein_id | F14H3 | CAB05485 | 2 | ||
DB_remark | C. elegans NHR-176 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F14H3.11 | |||
Corresponding_transcript | F14H3.11 | ||||
Corresponding_protein | WP:CE35482 | ||||
Corresponding_PCR_product | cenix:122-g5 | ||||
mv_F14H3.11 | |||||
sjj_F14H3.11 | |||||
Corresponding_RNAi_reagent | Cenix:122-g5 | ||||
sjj_F14H3.11 | |||||
Matching_cDNA | OSTF166E2_1 | Inferred_automatically | transcript_builder.pl | ||
RNAi_result | Cenix:122-g5 | ||||
JA:F14H3.11 | |||||
WB_RNAi_result | JA:F14H3.11 | ||||
MV_SV:mv_F14H3.11 | |||||
Cenix:122-g5 | |||||
GO_term | GO:0003700 | IEA | Inferred_automatically | ||
GO:0006355 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
GO:0003707 | IEA | Inferred_automatically | |||
Variation (5) | |||||
Microarray_results | SMD_F14H3.11 | ||||
192525_at | |||||
Aff_F14H3.11 | |||||
Brief_identification | Zinc finger, C4 type (two domains) | ||||
Remark | [030902 dl] Modified prediction based on OST data. Add intron to final exon, changes frame of final exon and extends to accomodate protein similarity | ||||
Method | curated |