CDS: F16B4.9
F16B4.9 | SMap | S_parent | Sequence | F16B4 | |
---|---|---|---|---|---|
Structure | Source_exons (9) | ||||
DB_info | Database | TREMBL | O44635_CAEEL | ||
TrEMBL_AC | O44635 | ||||
NDB | GI_number | 33620959 | |||
Protein_id | F16B4 | AAB94240 | 2 | ||
DB_remark | C. elegans NHR-178 protein; contains similarity to Pfam domain PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F16B4.9 | |||
Corresponding_transcript | F16B4.9 | ||||
Corresponding_protein | WP:CE17680 | ||||
Corresponding_PCR_product | cenix:126-b7 | ||||
mv_F16B4.c | |||||
sjj_F16B4.9 | |||||
mv_F16B4.9 | |||||
Corresponding_RNAi_reagent | Cenix:126-b7 | ||||
sjj_F16B4.9 | |||||
Matching_cDNA | OSTF181C12_1 | Inferred_automatically | transcript_builder.pl | ||
OSTR181C12_1 | Inferred_automatically | transcript_builder.pl | |||
OSTR191A4_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:126-b7 | ||||
JA:F16B4.9 | |||||
[cgc5655]:F16B4.9 | |||||
WB_RNAi_result | JA:F16B4.9 | ||||
[cgc5655]:F16B4.9 | |||||
MV_SV:mv_F16B4.c | |||||
Cenix:126-b7 | |||||
GO_term | GO:0003700 | IEA | Inferred_automatically | ||
GO:0006355 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
GO:0003707 | IEA | Inferred_automatically | |||
Microarray_results | SMD_F16B4.9 | ||||
190872_at | |||||
Aff_F16B4.9 | |||||
Brief_identification | nuclear hormone receptor | ||||
Remark | a new second exon was inserted based on protein similarities pointed out by Ann Sluder-980416-js | ||||
added internal exon based on OSTF181C12_1. [tb 200300807] | |||||
Method | curated |