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CDS: F17C8.2
| F17C8.2 | SMap | S_parent | Sequence | F17C8 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 99 | ||
| 151 | 942 | ||||
| DB_info | Database | TREMBL | Q19528_CAEEL | ||
| TrEMBL_AC | Q19528 | ||||
| NDB | GI_number | 3876006 | |||
| NCBI | RefSeq | NM_065574 | |||
| Protein_id | F17C8 | CAA84800 | 1 | ||
| DB_remark | C. elegans COL-89 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | F17C8.2 | |||
| Corresponding_transcript | F17C8.2 | ||||
| Corresponding_protein | WP:CE00956 | ||||
| Corresponding_PCR_product (5) | |||||
| Corresponding_RNAi_reagent | Cenix:300-h4 | ||||
| sjj_F17C8.2 | |||||
| TH:300H4 | |||||
| TH:332A2 | |||||
| Matching_cDNA | yk170g12.3 | Inferred_automatically | transcript_builder.pl | ||
| yk308b11.5 | Inferred_automatically | transcript_builder.pl | |||
| yk307f6.3 | Inferred_automatically | transcript_builder.pl | |||
| yk362e12.3 | Inferred_automatically | transcript_builder.pl | |||
| yk301f3.3 | Inferred_automatically | transcript_builder.pl | |||
| OSTR010C10_1 | Inferred_automatically | transcript_builder.pl | |||
| yk276h4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk170g12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk125f8.3 | Inferred_automatically | transcript_builder.pl | |||
| yk411b5.5 | Inferred_automatically | transcript_builder.pl | |||
| yk307f6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk308b11.3 | Inferred_automatically | transcript_builder.pl | |||
| yk191e5.5 | Inferred_automatically | transcript_builder.pl | |||
| yk276h4.3 | Inferred_automatically | transcript_builder.pl | |||
| yk409h10.3 | Inferred_automatically | transcript_builder.pl | |||
| yk576d9.3 | Inferred_automatically | transcript_builder.pl | |||
| yk576d9.5 | Inferred_automatically | transcript_builder.pl | |||
| yk191e5.3 | Inferred_automatically | transcript_builder.pl | |||
| yk409h10.5 | Inferred_automatically | transcript_builder.pl | |||
| yk364f4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk362e12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk364f4.3 | Inferred_automatically | transcript_builder.pl | |||
| yk301f3.5 | Inferred_automatically | transcript_builder.pl | |||
| yk125f8.5 | Inferred_automatically | transcript_builder.pl | |||
| yk411b5.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:300-h4 | ||||
| JA:F17C8.2 | |||||
| TH:300H4 | |||||
| TH:332A2 | |||||
| WB_RNAi_result (5) | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_F17C8.2 | ||||
| 189600_at | |||||
| Aff_F17C8.2 | |||||
| Brief_identification | cuticular collagen | ||||
| Method | curated |
