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CDS: F18A1.3b   

F18A1.3bSMapS_parentSequenceF18A1
Structure Source_exons (5)
DB_info Database TREMBL Q9Y051_CAEEL
TrEMBL_AC Q9Y051
NDB GI_number 14550439
Protein_idF18A1 AAK672491
DB_remarkC. elegans LIR-1 protein; contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBL CEL012485
Visible GeneF18A1.3
Corresponding_transcriptF18A1.3b
Corresponding_proteinWP:CE27974
Corresponding_PCR_product (6)
Corresponding_RNAi_reagent Cenix:28-c5
Cenix:204-d5
sjj_F18A1.3
Matching_cDNA yk779g04.3 Inferred_automaticallytranscript_builder.pl
yk1672g11.5 Inferred_automaticallytranscript_builder.pl
AJ012485 Inferred_automaticallytranscript_builder.pl
yk1375a12.5 Inferred_automaticallytranscript_builder.pl
RNAi_result Cenix:204-d5
JA:F18A1.3
Simmer:F18A1.3
Cenix:28-c5
WB_RNAi_result (6)
GO_term (8)
Variation uCE2-1758
uCE2-1759
uCE2-1760
Microarray_results SMD_F18A1.3
176605_s_at
Aff_F18A1.3
Remark SL2 trans-spliced; see AJ012485
3' exon overlaps 5' exon in F18A1.2b and is confirmed ok by mRNA data. tb 021010
EST yk1107d07.5 suggests there is an alternative form but it contains unusual splice sites and numerous stops so it would be difficult to fit it into any coding structure [20021101 po]
this isoform is based on EMBL accession CEL012485
Associated_feature WBsf000167
WBsf000169
Methodcurated