CDS: F18C12.2a
F18C12.2a | SMap | S_parent | Sequence | F18C12 | |
---|---|---|---|---|---|
Structure | Source_exons (23) | ||||
DB_info | Database | TREMBL | Q93529_CAEEL | ||
TrEMBL_AC | Q93529 | ||||
NDB | GI_number | 19571659 | |||
Protein_id | F18C12 | CAA99831 | 3 | ||
DB_remark | C. elegans RME-8 protein; contains similarity to Pfam domain PF00226 (DnaJ domain)contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR001623 (Heat shock protein DnaJ, N-terminal) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | C60694 | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | F18C12.2 | |||
Corresponding_transcript | F18C12.2a | ||||
Corresponding_protein | WP:CE30344 | ||||
Corresponding_PCR_product | cenix:84-b10 | ||||
sjj_F18C12.2 | |||||
mv_F18C12.2a | |||||
mv_F18C12.2b | |||||
Corresponding_RNAi_reagent | Cenix:84-b10 | ||||
sjj_F18C12.2 | |||||
Matching_cDNA (17) | |||||
RNAi_result (8) | |||||
WB_RNAi_result (5) | |||||
GO_term | GO:0040032 | IMP | Inferred_automatically | ||
GO:0040016 | IMP | Inferred_automatically | |||
GO:0007028 | IMP | Inferred_automatically | |||
GO:0009792 | IMP | Inferred_automatically | |||
GO:0002119 | IMP | Inferred_automatically | |||
GO:0040007 | IMP | Inferred_automatically | |||
GO:0007582 | IMP | Inferred_automatically | |||
GO:0018988 | IMP | Inferred_automatically | |||
GO:0007626 | IMP | Inferred_automatically | |||
GO:0005488 | IEA | Inferred_automatically | |||
GO:0031072 | IEA | Inferred_automatically | |||
GO:0051082 | IEA | Inferred_automatically | |||
GO:0006457 | IEA | Inferred_automatically | |||
Variation | b1023 | ||||
Microarray_results | SMD_F18C12.2 | ||||
189789_s_at | |||||
Aff_F18C12.2A | |||||
Brief_identification | DNA-J like domain | ||||
Remark | 960919: Small exon (32302..32325) added | ||||
[010724 kj] Changed 5' end according t gaze prediction to use better splice sites and prevent CeRep overlap. | |||||
[020225 kj] Removed intron 9 and 22 according to mRNA AF372457 and publication by Zhang, Grant and Hirsh (Mol Biol Cell 12, 2001). | |||||
Method | curated |