CDS: F21A3.7
F21A3.7 | SMap | S_parent | Sequence | SUPERLINK_CB_V | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 30 | ||
345 | 454 | ||||
1576 | 1713 | ||||
1858 | 2006 | ||||
2144 | 2228 | ||||
2388 | 2681 | ||||
3561 | 3606 | ||||
3703 | 3879 | ||||
4005 | 4153 | ||||
4196 | 4346 | ||||
DB_info | Database | TREMBL | Q9XTE5_CAEEL | ||
TrEMBL_AC | Q9XTE5 | ||||
NDB | GI_number | 51014200 | |||
Protein_id | C06B8 | CAB03855 | 2 | ||
F21A3 | CAB04158 | 2 | |||
DB_remark | contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region)contains similarity to Interpro domains IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F21A3.7 | |||
Corresponding_transcript | F21A3.7 | ||||
Corresponding_protein | WP:CE36643 | ||||
Corresponding_PCR_product | cenix:160-g10 | ||||
sjj_C06B8.8 | |||||
sjj_F21A3.7 | |||||
mv_F21A3.7 | |||||
Corresponding_RNAi_reagent | Cenix:160-g10 | ||||
sjj_C06B8.8 | |||||
sjj_F21A3.7 | |||||
Matching_cDNA | yk1711b08.3 | Inferred_automatically | transcript_builder.pl | ||
RNAi_result | Cenix:160-g10 | ||||
JA:C06B8.8 | |||||
JA:F21A3.7 | |||||
Simmer:C06B8.8 | |||||
WB_RNAi_result | JA:C06B8.8 | ||||
JA:F21A3.7 | |||||
Simmer:C06B8.8 | |||||
Cenix:160-g10 | |||||
GO_term (9) | |||||
Microarray_results | SMD_C06B8.8 | ||||
SMD_F21A3.7 | |||||
178969_at | |||||
Aff_C06B8.8 | |||||
Remark | [040318 dl] Modified prediction based on multiple-sequence alignment of ion channels. Added 3' exon | ||||
Method | curated |