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CDS: F22D6.10
| F22D6.10 | SMap | S_parent | Sequence | F22D6 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 144 | ||
| 191 | 825 | ||||
| 1278 | 1407 | ||||
| DB_info | Database | TREMBL | Q19725_CAEEL | ||
| TrEMBL_AC | Q19725 | ||||
| NDB | GI_number | 3876245 | |||
| NCBI | RefSeq | NM_059612 | |||
| Protein_id | F22D6 | CAA95812 | 1 | ||
| DB_remark | C. elegans COL-60 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | F22D6.10 | |||
| Corresponding_transcript | F22D6.10 | ||||
| Corresponding_protein | WP:CE05691 | ||||
| Corresponding_PCR_product | cenix:18-g4 | ||||
| mv_F22D6.10 | |||||
| sjj_F22D6.10 | |||||
| Corresponding_RNAi_reagent | Cenix:18-g4 | ||||
| sjj_F22D6.10 | |||||
| Matching_cDNA | yk279c9.3 | Inferred_automatically | transcript_builder.pl | ||
| OSTF078D4_1 | Inferred_automatically | transcript_builder.pl | |||
| yk253f9.5 | Inferred_automatically | transcript_builder.pl | |||
| yk279c9.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | JA:F22D6.10 | ||||
| Cenix:18-g4 | |||||
| WB_RNAi_result | SA:yk279c9 | ||||
| JA:F22D6.10 | |||||
| MV_SV:mv_F22D6.10 | |||||
| Cenix:18-g4 | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_F22D6.10 | ||||
| 188463_at | |||||
| Aff_F22D6.10 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
