CDS: F23F1.8a
F23F1.8a | SMap | S_parent | Sequence | F23F1 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 21 | ||
2471 | 2823 | ||||
2873 | 3600 | ||||
3652 | 3770 | ||||
DB_info | Database | SwissProt | SwissProt_ID | PRS10_CAEEL | |
SwissProt_AC | O17071 | ||||
NDB | GI_number | 15617798 | |||
Protein_id | F23F1 | AAB70326 | 2 | ||
DB_remark | C. elegans RPT-4 protein; contains similarity to Pfam domain PF00004 (ATPase family associated with various cellular activities (AAA))contains similarity to Interpro domains IPR003959 (AAA ATPase, central region), IPR003960 (AAA-protein subdomain), IPR005937 (26S proteasome subunit P45), IPR003593 (AAA ATPase) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | AU208472 | ||
Visible | Gene | F23F1.8 | |||
Corresponding_transcript | F23F1.8a | ||||
Corresponding_protein | WP:CE29280 | ||||
Corresponding_PCR_product | cenix:204-c7 | ||||
mv_F23F1.8 | |||||
sjj_F23F1.8 | |||||
mv_F23F1.1 | |||||
Corresponding_RNAi_reagent | Cenix:204-c7 | ||||
sjj_F23F1.8 | |||||
Matching_cDNA (83) | |||||
RNAi_result | Cenix:204-c7 | ||||
JA:F23F1.8 | |||||
Simmer:F23F1.8 | |||||
WB_RNAi_result (5) | |||||
GO_term (14) | |||||
Microarray_results | SMD_F23F1.8 | ||||
188424_s_at | |||||
Aff_F23F1.8 | |||||
Y2H_target (8) | |||||
Remark | added a new first exon based on EST data - 01-09-10 js | ||||
note that the first exon overlaps an exon from a gene on the other strand and both exons are confirmed by ESTs 021010 tb | |||||
this isoform is based on EMBL accession AU208472 | |||||
Associated_feature | WBsf012371 | ||||
Method | curated |