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CDS: F33A8.9
| F33A8.9 | SMap | S_parent | Sequence | F33A8 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (5) | |||||
| DB_info | Database | TREMBL | Q9NAQ4_CAEEL | |||
| TrEMBL_AC | Q9NAQ4 | |||||
| NDB | GI_number | 33589138 | ||||
| NCBI | RefSeq | NM_063966 | ||||
| Protein_id | F33A8 | CAB82206 | 2 | |||
| DB_remark | C. elegans COL-83 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | F33A8.9 | ||||
| Corresponding_transcript | F33A8.9 | |||||
| Corresponding_protein | WP:CE35183 | |||||
| Corresponding_PCR_product | cenix:60-c7 | |||||
| mv_F33A8.9 | ||||||
| Corresponding_RNAi_reagent | Cenix:60-c7 | |||||
| Matching_cDNA | OSTR102D10_1 | Inferred_automatically | transcript_builder.pl | |||
| OSTF102D10_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | Cenix:60-c7 | |||||
| WB_RNAi_result (2) | ||||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | |||
| GO:0006817 | IEA | Inferred_automatically | ||||
| GO:0005737 | IEA | Inferred_automatically | ||||
| Microarray_results | 188320_at | |||||
| Brief_identification | collagen | |||||
| Remark | [000127 dl] Prediction based on halfwise analysis | |||||
| [030806 pad] Gene prediction altered to follow OST data. Includes a new 3rd exon. | Accession_evidence | NDB | CB388618 | |||
| Method | curated |
