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CDS: F33D4.1a
| F33D4.1a | SMap | S_parent | Sequence | F33D4 | |
|---|---|---|---|---|---|
| Structure | Source_exons (9) | ||||
| DB_info | Database | SwissProt | SwissProt_ID | NHR8_CAEEL | |
| SwissProt_AC | Q9XYB7 | ||||
| NDB | GI_number | 30349076 | |||
| Protein_id | F33D4 | AAP31436 | 1 | ||
| DB_remark | C. elegans NHR-8 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | AF083226 | ||
| Visible | Gene | F33D4.1 | |||
| Corresponding_transcript | F33D4.1a | ||||
| Corresponding_protein | WP:CE33927 | ||||
| Corresponding_PCR_product | cenix:18-g5 | ||||
| mv_AAD03684 | |||||
| sjj_F33D4.1 | |||||
| Corresponding_RNAi_reagent | Cenix:18-g5 | ||||
| sjj_F33D4.1 | |||||
| Matching_cDNA | yk1625c05.5 | Inferred_automatically | transcript_builder.pl | ||
| OSTF021C3_1 | Inferred_automatically | transcript_builder.pl | |||
| AF083226 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | JA:F33D4.1 | ||||
| [cgc5655]:F33D4.1 | |||||
| Cenix:18-g5 | |||||
| WB_RNAi_result | JA:F33D4.1 | ||||
| [cgc5655]:F33D4.1 | |||||
| MV_SV:mv_AAD03684 | |||||
| Cenix:18-g5 | |||||
| GO_term (6) | |||||
| Variation | ok186 | ||||
| tm1800 | |||||
| uCE4-1011 | |||||
| uCE4-1012 | |||||
| Microarray_results | SMD_F33D4.1 | ||||
| 193749_at | |||||
| Aff_F33D4.1 | |||||
| Brief_identification | zinc finger protein/hormone receptor | ||||
| Remark | this isoform is based on EMBL accession AF083226 | ||||
| Method | curated |
