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CDS: F38B6.5a   

F38B6.5aSMapS_parentSequenceF38B6
Structure Source_exons (6)
DB_info Database TREMBL Q20142_CAEEL
TrEMBL_AC Q20142
NDB GI_number 1055175
Protein_idF38B6 AAA811411
DB_remarkC. elegans COL-172 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBL C71059
Visible GeneF38B6.5
Corresponding_transcriptF38B6.5a
Corresponding_proteinWP:CE04518
Corresponding_PCR_product cenix:60-g8
mv_F38B6.5
sjj_F38B6.5
Corresponding_RNAi_reagent Cenix:60-g8
sjj_F38B6.5
Matching_cDNA (9)
RNAi_result Cenix:60-g8
JA:F38B6.5
WB_RNAi_result JA:F38B6.5
MV_SV:mv_F38B6.5
Cenix:60-g8
GO_term GO:0042302 IEA Inferred_automatically
GO:0006817 IEA Inferred_automatically
GO:0005737 IEA Inferred_automatically
Microarray_results SMD_F38B6.5
189803_at
Aff_F38B6.5
Brief_identificationcuticular collagen
Remarkthis isoform is based on EMBL accession C71059
Methodcurated