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CDS: F38B6.5b
| F38B6.5b | SMap | S_parent | Sequence | F38B6 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 84 | ||
| 184 | 426 | ||||
| DB_info | Database | TREMBL | Q7YZV5_CAEEL | ||
| TrEMBL_AC | Q7YZV5 | ||||
| NDB | GI_number | 32453015 | |||
| Protein_id | F38B6 | AAP82656 | 1 | ||
| DB_remark | C. elegans COL-172 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies))contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | AU198870 | ||
| Visible | Gene | F38B6.5 | |||
| Corresponding_transcript | F38B6.5b.1 | ||||
| F38B6.5b.2 | |||||
| Corresponding_protein | WP:CE34552 | ||||
| Corresponding_PCR_product (3) | |||||
| Matching_cDNA | OSTR011E10_1 | Inferred_automatically | transcript_builder.pl | ||
| yk757c12.5 | Inferred_automatically | transcript_builder.pl | |||
| WB_RNAi_result | JA:F38B6.5 | ||||
| MV_SV:mv_F38B6.5 | |||||
| Cenix:60-g8 | |||||
| GO_term | GO:0006817 | IEA | Inferred_automatically | ||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_F38B6.5 | ||||
| 189803_at | |||||
| Aff_F38B6.5 | |||||
| Remark | this isoform is based on EMBL accession AU198870 | ||||
| Method | curated |
