CDS: F38B6.5b
F38B6.5b | SMap | S_parent | Sequence | F38B6 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 84 | ||
184 | 426 | ||||
DB_info | Database | TREMBL | Q7YZV5_CAEEL | ||
TrEMBL_AC | Q7YZV5 | ||||
NDB | GI_number | 32453015 | |||
Protein_id | F38B6 | AAP82656 | 1 | ||
DB_remark | C. elegans COL-172 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies))contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | AU198870 | ||
Visible | Gene | F38B6.5 | |||
Corresponding_transcript | F38B6.5b.1 | ||||
F38B6.5b.2 | |||||
Corresponding_protein | WP:CE34552 | ||||
Corresponding_PCR_product | cenix:60-g8 | ||||
mv_F38B6.5 | |||||
sjj_F38B6.5 | |||||
Matching_cDNA | OSTR011E10_1 | Inferred_automatically | transcript_builder.pl | ||
yk757c12.5 | Inferred_automatically | transcript_builder.pl | |||
WB_RNAi_result | JA:F38B6.5 | ||||
MV_SV:mv_F38B6.5 | |||||
Cenix:60-g8 | |||||
GO_term | GO:0006817 | IEA | Inferred_automatically | ||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results (3) | |||||
Remark | this isoform is based on EMBL accession AU198870 | ||||
Method | curated |