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CDS: F39H2.2a
| F39H2.2a | SMap | S_parent | Sequence | SUPERLINK_CB_I | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | O18161_CAEEL | ||
| TrEMBL_AC | O18161 | ||||
| NDB | GI_number | 25005033 | |||
| NCBI | RefSeq | NM_059942 | |||
| Protein_id | F39H2 | CAB03088 | 2 | ||
| VF39H2L | CAB10726 | 2 | |||
| DB_remark | C. elegans CYN-14 protein; contains similarity to Pfam domains PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase), PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain))contains similarity to Interpro domains IPR002130 (Peptidyl-prolyl cis-trans isomerase, cyclophilin type), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA-binding region RNP-1 (RNA recognition motif)) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | NDB | CB389829 | ||
| Inferred_automatically | transcript_builder | ||||
| Visible | Gene | F39H2.2 | |||
| Corresponding_transcript | F39H2.2a | ||||
| Corresponding_protein | WP:CE32410 | ||||
| Corresponding_PCR_product | cenix:32-a11 | ||||
| mv_F39H2.2 | |||||
| sjj_F39H2.2 | |||||
| Corresponding_RNAi_reagent | Cenix:32-a11 | ||||
| Matching_cDNA (15) | |||||
| RNAi_result | Cenix:32-a11 | ||||
| WB_RNAi_result | MV_SV:mv_F39H2.2 | ||||
| Cenix:32-a11 | |||||
| GO_term (6) | |||||
| Variation | snp_VF39H2L[2] | ||||
| snp_VF39H2L[3] | |||||
| tm2016 | |||||
| Microarray_results | SMD_F39H2.2 | ||||
| 175361_at | |||||
| Brief_identification | peptidylprolyl isomerase | ||||
| Remark | [dl 961204] Pfam signature for Peptidyl-prolyl cis-trans isomerases (PF00160) | ||||
| [dl 970611] Blastx homology suggests new exon 1. | |||||
| [alt] Alternate isoform defined by EST yk713e3 | |||||
| [tsl] SL2 trans-spliced | |||||
| Associated_feature | WBsf002372 | ||||
| Method | curated |
