Gene: F39H2.3
F39H2.3 | SMap | S_parent | Sequence | SUPERLINK_CB_I | ||
---|---|---|---|---|---|---|
Chromosome | I | |||||
Identity (5) | ||||||
Gene_info | Allele | tm2016 | ||||
GO_term | GO:0004047 | IEA | Inferred_automatically | |||
GO:0006546 | IEA | Inferred_automatically | ||||
GO:0005737 | IEA | Inferred_automatically | ||||
Contained_in_operon | CEOP1496 | |||||
Structured_description | Provisional_description | This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. | Paper_evidence | WBPaper00004424 | ||
Person_evidence | WBPerson567 | |||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Proteins localized to a given organelle by experiments tend to share a characteristic phylogenetic distribution of their homologs, called a phylogenetic profile. | ||||||
For instance, mitochondrial proteins can be identified effectively by their phylogenetic profiles. | ||||||
By applying phylogenetic profile analysis to the C. elegans genome, Eisenberg and coworkers inferred that this gene, along with 2-4% of all the nuclear genes in C. elegans, encodes a mitochondrial protein. | ||||||
The large fraction of organism-specific and eukaryote-derived genes suggests that C. elegans mitochondria perform specialized roles absent from prokaryotic mitochondrial ancestors. | ||||||
Concise_description | This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. | |||||
Molecular_info | Corresponding_CDS | F39H2.3 | ||||
Corresponding_CDS_history | F39H2.3:wp132 | |||||
Corresponding_protein | WP:CE37516 | |||||
KOG | KOG2929 | |||||
Corresponding_PCR_product | smd_F39H2.3 | |||||
smd_F39H2.3:2 | ||||||
sjj_F39H2.3 | ||||||
Corresponding_RNAi_reagent | Cenix:139-c4 | |||||
sjj_F39H2.3 | ||||||
Experimental_info | RNAi_result | Cenix:139-c4 | ||||
JA:F39H2.3 | ||||||
WB_RNAi_result | JA:F39H2.3 | |||||
Cenix:139-c4 | ||||||
Method | Gene |