CDS: F41F3.4
F41F3.4 | SMap | S_parent | Sequence | F41F3 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 81 | ||
135 | 257 | ||||
321 | 1049 | ||||
DB_info | Database | TREMBL | Q20282_CAEEL | ||
TrEMBL_AC | Q20282 | ||||
NDB | GI_number | 1280073 | |||
NCBI | RefSeq | NM_071851 | |||
Protein_id | F41F3 | AAA97982 | 1 | ||
DB_remark | C. elegans COL-139 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | F41F3.4 | |||
Corresponding_transcript | F41F3.4 | ||||
Corresponding_protein | WP:CE07218 | ||||
Corresponding_PCR_product | cenix:175-e2 | ||||
sjj_F41F3.4 | |||||
mv_F41F3.4 | |||||
Corresponding_RNAi_reagent | Cenix:175-e2 | ||||
sjj_F41F3.4 | |||||
Matching_cDNA | yk55c12.3 | Inferred_automatically | transcript_builder.pl | ||
CK578957 | Inferred_automatically | transcript_builder.pl | |||
CK580224 | Inferred_automatically | transcript_builder.pl | |||
CK577020 | Inferred_automatically | transcript_builder.pl | |||
CK583827 | Inferred_automatically | transcript_builder.pl | |||
yk739g5.5 | Inferred_automatically | transcript_builder.pl | |||
yk55c12.5 | Inferred_automatically | transcript_builder.pl | |||
yk739g5.3 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:175-e2 | ||||
JA:F41F3.4 | |||||
Simmer:F41F3.4:Repeat_a | |||||
Simmer:F41F3.4:Screen | |||||
WB_RNAi_result | JA:F41F3.4 | ||||
Simmer:F41F3.4:Repeat_a | |||||
Simmer:F41F3.4:Screen | |||||
Cenix:175-e2 | |||||
GO_term (5) | |||||
Microarray_results | SMD_F41F3.4 | ||||
189545_s_at | |||||
Aff_F41F3.4 | |||||
Brief_identification | cuticle collagen | ||||
Y2H_target | Y2H007057 | ||||
Method | curated |