CDS: F44C8.4
F44C8.4 | SMap | S_parent | Sequence | F44C8 | |
---|---|---|---|---|---|
Structure | Source_exons (7) | ||||
DB_info | Database | TREMBL | O16359_CAEEL | ||
TrEMBL_AC | O16359 | ||||
NDB | GI_number | 15145353 | |||
NCBI | RefSeq | NM_071206 | |||
Protein_id | F44C8 | AAB65891 | 2 | ||
DB_remark | C. elegans NHR-103 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | F44C8.4 | |||
Corresponding_transcript | F44C8.4 | ||||
Corresponding_protein | WP:CE27384 | ||||
Corresponding_PCR_product | cenix:41-a2 | ||||
mv_F44C8.4 | |||||
sjj_F44C8.4 | |||||
mv_F44C8.f | |||||
Corresponding_RNAi_reagent | Cenix:41-a2 | ||||
sjj_F44C8.4 | |||||
Matching_cDNA | yk722c6.3 | Inferred_automatically | transcript_builder.pl | ||
OSTF179H5_1 | Inferred_automatically | transcript_builder.pl | |||
yk722c6.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:41-a2 | ||||
JA:F44C8.4 | |||||
WB_RNAi_result | JA:F44C8.4 | ||||
MV_SV:mv_F44C8.4 | |||||
GO_term | GO:0003700 | IEA | Inferred_automatically | ||
GO:0006355 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
GO:0003707 | IEA | Inferred_automatically | |||
Variation | cxP10736 | ||||
Microarray_results | SMD_F44C8.4 | ||||
190850_at | |||||
Aff_F44C8.4 | |||||
Brief_identification | nulcear hormone receptor | ||||
Remark | the first exon was split in two based on a note from Ann Sluder-980422-js | ||||
SL2 trans-spliced; see yk722c6.5 | |||||
Associated_feature | WBsf008942 | ||||
Method | curated |