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CDS: F52B11.4   

F52B11.4SMapS_parentSequenceF52B11
Structure Source_exons 181
152985
DB_info Database TREMBL Q9XUE9_CAEEL
TrEMBL_AC Q9XUE9
NDB GI_number 3877422
NCBI RefSeq NM_070299
Protein_idF52B11 CAB051951
DB_remarkC. elegans COL-133 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneF52B11.4
Corresponding_transcriptF52B11.4
Corresponding_proteinWP:CE18724
Corresponding_PCR_product cenix:185-b2
mv_F52B11.4
sjj_F52B11.4
Corresponding_RNAi_reagent Cenix:185-b2
sjj_F52B11.4
Matching_cDNA OSTF056F9_1 Inferred_automaticallytranscript_builder.pl
OSTF146D6_1 Inferred_automaticallytranscript_builder.pl
OSTR146D6_1 Inferred_automaticallytranscript_builder.pl
RNAi_result (5)
WB_RNAi_result (22)
GO_term (12)
Variationsnp_F52B11[2]
Microarray_results SMD_F52B11.4
172821_x_at
Aff_F52B11.4
Brief_identificationCUTICLE COLLAGEN 34
RemarkAnnotation based on homology to SwissProt P34687 (BLASTP score 808)
Methodcurated