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CDS: F52B11.4
| F52B11.4 | SMap | S_parent | Sequence | F52B11 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 81 | ||
| 152 | 985 | ||||
| DB_info | Database | TREMBL | Q9XUE9_CAEEL | ||
| TrEMBL_AC | Q9XUE9 | ||||
| NDB | GI_number | 3877422 | |||
| NCBI | RefSeq | NM_070299 | |||
| Protein_id | F52B11 | CAB05195 | 1 | ||
| DB_remark | C. elegans COL-133 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | F52B11.4 | |||
| Corresponding_transcript | F52B11.4 | ||||
| Corresponding_protein | WP:CE18724 | ||||
| Corresponding_PCR_product (3) | |||||
| Corresponding_RNAi_reagent | Cenix:185-b2 | ||||
| sjj_F52B11.4 | |||||
| Matching_cDNA | OSTF056F9_1 | Inferred_automatically | transcript_builder.pl | ||
| OSTF146D6_1 | Inferred_automatically | transcript_builder.pl | |||
| OSTR146D6_1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result (5) | |||||
| WB_RNAi_result (22) | |||||
| GO_term (12) | |||||
| Variation | snp_F52B11[2] | ||||
| Microarray_results | SMD_F52B11.4 | ||||
| 172821_x_at | |||||
| Aff_F52B11.4 | |||||
| Brief_identification | CUTICLE COLLAGEN 34 | ||||
| Remark | Annotation based on homology to SwissProt P34687 (BLASTP score 808) | ||||
| Method | curated |
