CDS: F52F12.2
F52F12.2 | SMap | S_parent | Sequence | F52F12 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 144 | ||
546 | 931 | ||||
1029 | 1297 | ||||
1586 | 1899 | ||||
DB_info | Database | TREMBL | O02271_CAEEL | ||
TrEMBL_AC | O02271 | ||||
NDB | GI_number | 3877433 | |||
NCBI | RefSeq | NM_060218 | |||
Protein_id | F52F12 | CAB05733 | 1 | ||
DB_remark | C. elegans COL-64 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F52F12.2 | |||
Corresponding_transcript | F52F12.2 | ||||
Corresponding_protein | WP:CE10842 | ||||
Corresponding_PCR_product | cenix:131-e3 | ||||
mv_F52F12.2 | |||||
sjj_F52F12.2 | |||||
smd_F52F12.2:2 | |||||
Corresponding_RNAi_reagent | Cenix:131-e3 | ||||
sjj_F52F12.2 | |||||
Matching_cDNA | OSTF063G3_1 | Inferred_automatically | transcript_builder.pl | ||
OSTR063G3_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:131-e3 | ||||
JA:F52F12.2 | |||||
WB_RNAi_result | JA:F52F12.2 | ||||
MV_SV:mv_F52F12.2 | |||||
Cenix:131-e3 | |||||
GO_term (3) | |||||
Microarray_results | SMD_F52F12.2 | ||||
SMD_F52F12.2:2 | |||||
188481_at | |||||
Aff_F52F12.2 | |||||
Brief_identification | collagen | ||||
Method | curated |