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CDS: F53F10.2b   

F53F10.2bSMapS_parentSequenceF53F10
Structure Source_exons (4)
DB_info Database TREMBL Q8T3B3_CAEEL
TrEMBL_AC Q8T3B3
NDB GI_number 20198830
Protein_idF53F10 AAM155761
DB_remarkcontains similarity to Pfam domain PF02784 (Pyridoxal-dependent decarboxylase, pyridoxal binding domain)contains similarity to Interpro domains IPR000183 (Orn/DAP/Arg decarboxylase 2), IPR002433 (Ornithine decarboxylase)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBL BJ153734
Visible GeneF53F10.2
Corresponding_transcript F53F10.2b.1
F53F10.2b.2
F53F10.2b.3
F53F10.2b.4
Corresponding_proteinWP:CE30374
Corresponding_PCR_product cenix:72-d1
mv_F53F10.2
sjj_F53F10.2
Matching_cDNA yk1662e12.5 Inferred_automaticallytranscript_builder.pl
yk770d10.5 Inferred_automaticallytranscript_builder.pl
yk1089f02.5 Inferred_automaticallytranscript_builder.pl
yk1322g08.3 Inferred_automaticallytranscript_builder.pl
yk1119b12.5 Inferred_automaticallytranscript_builder.pl
yk1431c11.3 Inferred_automaticallytranscript_builder.pl
yk1588a12.3 Inferred_automaticallytranscript_builder.pl
yk879g08.3 Inferred_automaticallytranscript_builder.pl
yk464g8.3 Inferred_automaticallytranscript_builder.pl
yk1177b05.5 Inferred_automaticallytranscript_builder.pl
yk1623d07.3 Inferred_automaticallytranscript_builder.pl
yk1239d10.5 Inferred_automaticallytranscript_builder.pl
CK590073 Inferred_automaticallytranscript_builder.pl
CK589153 Inferred_automaticallytranscript_builder.pl
yk384b1.3 Inferred_automaticallytranscript_builder.pl
yk459c5.3 Inferred_automaticallytranscript_builder.pl
CK590103 Inferred_automaticallytranscript_builder.pl
yk1273b03.5 Inferred_automaticallytranscript_builder.pl
yk1188e09.5 Inferred_automaticallytranscript_builder.pl
yk1325f10.5 Inferred_automaticallytranscript_builder.pl
yk1240d06.5 Inferred_automaticallytranscript_builder.pl
yk1251f03.5 Inferred_automaticallytranscript_builder.pl
yk678b3.3 Inferred_automaticallytranscript_builder.pl
yk676f3.3 Inferred_automaticallytranscript_builder.pl
yk1742d07.5 Inferred_automaticallytranscript_builder.pl
yk63a7.5 Inferred_automaticallytranscript_builder.pl
yk1295g10.5 Inferred_automaticallytranscript_builder.pl
yk1165e07.5 Inferred_automaticallytranscript_builder.pl
yk386h9.3 Inferred_automaticallytranscript_builder.pl
CK589992 Inferred_automaticallytranscript_builder.pl
CK590271 Inferred_automaticallytranscript_builder.pl
yk275b10.3 Inferred_automaticallytranscript_builder.pl
yk1168e02.5 Inferred_automaticallytranscript_builder.pl
yk605h11.3 Inferred_automaticallytranscript_builder.pl
yk1263f05.5 Inferred_automaticallytranscript_builder.pl
yk1089e06.3 Inferred_automaticallytranscript_builder.pl
yk577b2.5 Inferred_automaticallytranscript_builder.pl
yk1106d04.5 Inferred_automaticallytranscript_builder.pl
yk514d10.5 Inferred_automaticallytranscript_builder.pl
yk676f3.5 Inferred_automaticallytranscript_builder.pl
yk878e10.5 Inferred_automaticallytranscript_builder.pl
yk1408c05.5 Inferred_automaticallytranscript_builder.pl
yk464g8.5 Inferred_automaticallytranscript_builder.pl
CK590150 Inferred_automaticallytranscript_builder.pl
yk1292d10.5 Inferred_automaticallytranscript_builder.pl
yk1662g09.5 Inferred_automaticallytranscript_builder.pl
yk384b1.5 Inferred_automaticallytranscript_builder.pl
yk196a3.3 Inferred_automaticallytranscript_builder.pl
CK583562 Inferred_automaticallytranscript_builder.pl
yk317e6.3 Inferred_automaticallytranscript_builder.pl
yk1128h05.5 Inferred_automaticallytranscript_builder.pl
yk1182f03.5 Inferred_automaticallytranscript_builder.pl
yk877d03.5 Inferred_automaticallytranscript_builder.pl
yk1416e10.5 Inferred_automaticallytranscript_builder.pl
yk1157f11.5 Inferred_automaticallytranscript_builder.pl
yk1298e06.5 Inferred_automaticallytranscript_builder.pl
OSTF085A5_1 Inferred_automaticallytranscript_builder.pl
yk1589b08.3 Inferred_automaticallytranscript_builder.pl
yk40c6.5 Inferred_automaticallytranscript_builder.pl
yk681g1.3 Inferred_automaticallytranscript_builder.pl
yk869f06.5 Inferred_automaticallytranscript_builder.pl
yk301b6.3 Inferred_automaticallytranscript_builder.pl
yk753f04.5 Inferred_automaticallytranscript_builder.pl
yk1677h06.5 Inferred_automaticallytranscript_builder.pl
yk1603d02.3 Inferred_automaticallytranscript_builder.pl
yk1370e04.3 Inferred_automaticallytranscript_builder.pl
yk1041f01.5 Inferred_automaticallytranscript_builder.pl
yk854d06.3 Inferred_automaticallytranscript_builder.pl
CK586368 Inferred_automaticallytranscript_builder.pl
yk1104e10.3 Inferred_automaticallytranscript_builder.pl
yk196a3.5 Inferred_automaticallytranscript_builder.pl
yk132a9.5 Inferred_automaticallytranscript_builder.pl
yk1329g03.5 Inferred_automaticallytranscript_builder.pl
cm22b7.5 Inferred_automaticallytranscript_builder.pl
yk1397d12.3 Inferred_automaticallytranscript_builder.pl
yk605h11.5 Inferred_automaticallytranscript_builder.pl
CK589155 Inferred_automaticallytranscript_builder.pl
CK590339 Inferred_automaticallytranscript_builder.pl
yk678b3.5 Inferred_automaticallytranscript_builder.pl
CK589948 Inferred_automaticallytranscript_builder.pl
CK590078 Inferred_automaticallytranscript_builder.pl
CK590012 Inferred_automaticallytranscript_builder.pl
yk847f08.5 Inferred_automaticallytranscript_builder.pl
yk1405e06.5 Inferred_automaticallytranscript_builder.pl
yk1440c06.5 Inferred_automaticallytranscript_builder.pl
yk843a11.5 Inferred_automaticallytranscript_builder.pl
yk1594d02.5 Inferred_automaticallytranscript_builder.pl
yk1227a05.5 Inferred_automaticallytranscript_builder.pl
yk1207b01.5 Inferred_automaticallytranscript_builder.pl
yk1388h04.5 Inferred_automaticallytranscript_builder.pl
yk1608e08.5 Inferred_automaticallytranscript_builder.pl
yk1723e03.5 Inferred_automaticallytranscript_builder.pl
yk1396a07.5 Inferred_automaticallytranscript_builder.pl
yk1090h09.5 Inferred_automaticallytranscript_builder.pl
yk1285f02.5 Inferred_automaticallytranscript_builder.pl
yk1733f08.5 Inferred_automaticallytranscript_builder.pl
yk1396b05.5 Inferred_automaticallytranscript_builder.pl
yk869h12.5 Inferred_automaticallytranscript_builder.pl
yk1615b09.5 Inferred_automaticallytranscript_builder.pl
yk1372b04.5 Inferred_automaticallytranscript_builder.pl
yk1558g02.5 Inferred_automaticallytranscript_builder.pl
yk1707a09.5 Inferred_automaticallytranscript_builder.pl
yk1481b12.5 Inferred_automaticallytranscript_builder.pl
yk1580a09.5 Inferred_automaticallytranscript_builder.pl
yk1303e12.5 Inferred_automaticallytranscript_builder.pl
yk1064d07.5 Inferred_automaticallytranscript_builder.pl
yk1089g07.5 Inferred_automaticallytranscript_builder.pl
yk1166a02.5 Inferred_automaticallytranscript_builder.pl
yk1653g03.5 Inferred_automaticallytranscript_builder.pl
yk1442e07.5 Inferred_automaticallytranscript_builder.pl
yk1379g10.5 Inferred_automaticallytranscript_builder.pl
yk1427g01.5 Inferred_automaticallytranscript_builder.pl
yk1577g03.5 Inferred_automaticallytranscript_builder.pl
yk1370c07.5 Inferred_automaticallytranscript_builder.pl
yk1536a06.5 Inferred_automaticallytranscript_builder.pl
yk1366h09.5 Inferred_automaticallytranscript_builder.pl
yk1012e01.5 Inferred_automaticallytranscript_builder.pl
yk1163c05.5 Inferred_automaticallytranscript_builder.pl
yk1418a12.5 Inferred_automaticallytranscript_builder.pl
yk1740c10.5 Inferred_automaticallytranscript_builder.pl
yk1315f11.5 Inferred_automaticallytranscript_builder.pl
yk1350c03.5 Inferred_automaticallytranscript_builder.pl
yk1378b10.5 Inferred_automaticallytranscript_builder.pl
yk763h11.5 Inferred_automaticallytranscript_builder.pl
yk1060b11.5 Inferred_automaticallytranscript_builder.pl
yk1716e05.5 Inferred_automaticallytranscript_builder.pl
yk1413g11.5 Inferred_automaticallytranscript_builder.pl
yk1246b03.5 Inferred_automaticallytranscript_builder.pl
yk825c11.5 Inferred_automaticallytranscript_builder.pl
yk1609b05.5 Inferred_automaticallytranscript_builder.pl
yk1409f08.5 Inferred_automaticallytranscript_builder.pl
yk1711b12.5 Inferred_automaticallytranscript_builder.pl
yk1659d05.5 Inferred_automaticallytranscript_builder.pl
yk1465f03.5 Inferred_automaticallytranscript_builder.pl
yk1449b12.5 Inferred_automaticallytranscript_builder.pl
yk1245b04.5 Inferred_automaticallytranscript_builder.pl
yk768g08.5 Inferred_automaticallytranscript_builder.pl
yk1740d09.5 Inferred_automaticallytranscript_builder.pl
yk853d05.5 Inferred_automaticallytranscript_builder.pl
yk1577e04.5 Inferred_automaticallytranscript_builder.pl
yk1128e10.5 Inferred_automaticallytranscript_builder.pl
yk1718b02.5 Inferred_automaticallytranscript_builder.pl
yk1728h06.5 Inferred_automaticallytranscript_builder.pl
yk1490c05.5 Inferred_automaticallytranscript_builder.pl
yk1714g05.5 Inferred_automaticallytranscript_builder.pl
yk885c01.5 Inferred_automaticallytranscript_builder.pl
yk1703d09.5 Inferred_automaticallytranscript_builder.pl
yk1502d08.5 Inferred_automaticallytranscript_builder.pl
yk1721a09.5 Inferred_automaticallytranscript_builder.pl
yk1681a02.5 Inferred_automaticallytranscript_builder.pl
yk812d06.5 Inferred_automaticallytranscript_builder.pl
yk1693h05.5 Inferred_automaticallytranscript_builder.pl
yk878b03.5 Inferred_automaticallytranscript_builder.pl
yk1372f05.5 Inferred_automaticallytranscript_builder.pl
yk1238g05.5 Inferred_automaticallytranscript_builder.pl
yk1052e05.5 Inferred_automaticallytranscript_builder.pl
yk1620g05.5 Inferred_automaticallytranscript_builder.pl
yk1607h05.5 Inferred_automaticallytranscript_builder.pl
yk1589b08.5 Inferred_automaticallytranscript_builder.pl
yk863a11.5 Inferred_automaticallytranscript_builder.pl
yk1555f10.5 Inferred_automaticallytranscript_builder.pl
yk1322c12.5 Inferred_automaticallytranscript_builder.pl
yk1401d09.5 Inferred_automaticallytranscript_builder.pl
yk1567g01.5 Inferred_automaticallytranscript_builder.pl
yk1298b11.5 Inferred_automaticallytranscript_builder.pl
yk1104e10.5 Inferred_automaticallytranscript_builder.pl
yk1731d05.5 Inferred_automaticallytranscript_builder.pl
yk1628g06.5 Inferred_automaticallytranscript_builder.pl
yk1134b11.5 Inferred_automaticallytranscript_builder.pl
yk1227a11.5 Inferred_automaticallytranscript_builder.pl
yk1704h05.5 Inferred_automaticallytranscript_builder.pl
yk1415d05.5 Inferred_automaticallytranscript_builder.pl
yk1750d03.5 Inferred_automaticallytranscript_builder.pl
yk1747f03.5 Inferred_automaticallytranscript_builder.pl
yk1712d02.5 Inferred_automaticallytranscript_builder.pl
yk1367d03.5 Inferred_automaticallytranscript_builder.pl
yk813d11.5 Inferred_automaticallytranscript_builder.pl
yk1615c11.5 Inferred_automaticallytranscript_builder.pl
yk1588a12.5 Inferred_automaticallytranscript_builder.pl
yk1505c08.5 Inferred_automaticallytranscript_builder.pl
yk1607e08.5 Inferred_automaticallytranscript_builder.pl
yk1716c06.5 Inferred_automaticallytranscript_builder.pl
yk1650d12.5 Inferred_automaticallytranscript_builder.pl
yk1390a05.5 Inferred_automaticallytranscript_builder.pl
yk1590c09.5 Inferred_automaticallytranscript_builder.pl
yk1548b03.5 Inferred_automaticallytranscript_builder.pl
yk1437f07.5 Inferred_automaticallytranscript_builder.pl
yk1394a07.5 Inferred_automaticallytranscript_builder.pl
yk1215b03.5 Inferred_automaticallytranscript_builder.pl
yk1711a11.5 Inferred_automaticallytranscript_builder.pl
yk1043h12.5 Inferred_automaticallytranscript_builder.pl
yk1517f05.5 Inferred_automaticallytranscript_builder.pl
yk1614e10.5 Inferred_automaticallytranscript_builder.pl
yk1730f12.5 Inferred_automaticallytranscript_builder.pl
yk815b01.5 Inferred_automaticallytranscript_builder.pl
yk1170c02.5 Inferred_automaticallytranscript_builder.pl
yk1505c02.5 Inferred_automaticallytranscript_builder.pl
yk1096a03.5 Inferred_automaticallytranscript_builder.pl
yk1235a02.5 Inferred_automaticallytranscript_builder.pl
yk1297h01.5 Inferred_automaticallytranscript_builder.pl
yk1412e03.5 Inferred_automaticallytranscript_builder.pl
yk1730d11.5 Inferred_automaticallytranscript_builder.pl
yk1064a05.5 Inferred_automaticallytranscript_builder.pl
yk1530f04.5 Inferred_automaticallytranscript_builder.pl
yk1501h03.5 Inferred_automaticallytranscript_builder.pl
yk1734c11.5 Inferred_automaticallytranscript_builder.pl
yk1710d03.5 Inferred_automaticallytranscript_builder.pl
yk758c01.5 Inferred_automaticallytranscript_builder.pl
yk1181a11.5 Inferred_automaticallytranscript_builder.pl
yk1529c07.5 Inferred_automaticallytranscript_builder.pl
yk1622d11.5 Inferred_automaticallytranscript_builder.pl
yk1483d03.5 Inferred_automaticallytranscript_builder.pl
yk1397a11.5 Inferred_automaticallytranscript_builder.pl
yk1402g03.5 Inferred_automaticallytranscript_builder.pl
yk1603f11.5 Inferred_automaticallytranscript_builder.pl
yk1306f06.5 Inferred_automaticallytranscript_builder.pl
yk1365c07.5 Inferred_automaticallytranscript_builder.pl
yk1055g10.5 Inferred_automaticallytranscript_builder.pl
yk801f07.5 Inferred_automaticallytranscript_builder.pl
yk786c08.5 Inferred_automaticallytranscript_builder.pl
yk1519b01.5 Inferred_automaticallytranscript_builder.pl
yk1322g08.5 Inferred_automaticallytranscript_builder.pl
yk1576c08.5 Inferred_automaticallytranscript_builder.pl
yk1727c04.5 Inferred_automaticallytranscript_builder.pl
yk831c03.5 Inferred_automaticallytranscript_builder.pl
yk1626e01.5 Inferred_automaticallytranscript_builder.pl
yk1745f02.5 Inferred_automaticallytranscript_builder.pl
yk1052f12.5 Inferred_automaticallytranscript_builder.pl
yk1635d09.5 Inferred_automaticallytranscript_builder.pl
yk830b09.5 Inferred_automaticallytranscript_builder.pl
yk1690h12.5 Inferred_automaticallytranscript_builder.pl
yk1733h02.5 Inferred_automaticallytranscript_builder.pl
yk1609e04.5 Inferred_automaticallytranscript_builder.pl
yk1431d08.5 Inferred_automaticallytranscript_builder.pl
yk1633g09.5 Inferred_automaticallytranscript_builder.pl
yk1626e10.5 Inferred_automaticallytranscript_builder.pl
yk1228f06.5 Inferred_automaticallytranscript_builder.pl
yk1537b06.5 Inferred_automaticallytranscript_builder.pl
yk1447d02.5 Inferred_automaticallytranscript_builder.pl
yk1512f08.5 Inferred_automaticallytranscript_builder.pl
yk1138h08.5 Inferred_automaticallytranscript_builder.pl
yk1565c12.5 Inferred_automaticallytranscript_builder.pl
yk1288h04.5 Inferred_automaticallytranscript_builder.pl
yk1641e11.5 Inferred_automaticallytranscript_builder.pl
yk1374a05.5 Inferred_automaticallytranscript_builder.pl
yk1149g03.5 Inferred_automaticallytranscript_builder.pl
yk1258a09.5 Inferred_automaticallytranscript_builder.pl
yk1485c04.5 Inferred_automaticallytranscript_builder.pl
yk1050e12.5 Inferred_automaticallytranscript_builder.pl
yk780a11.5 Inferred_automaticallytranscript_builder.pl
yk1245e02.5 Inferred_automaticallytranscript_builder.pl
yk1106a12.5 Inferred_automaticallytranscript_builder.pl
yk1102h08.5 Inferred_automaticallytranscript_builder.pl
WB_RNAi_result JA:F53F10.2
MV_SV:mv_F53F10.2
Cenix:72-d1
GO_term GO:0003824 IEA Inferred_automatically
GO:0006596 IEA Inferred_automatically
Microarray_results (3)
Y2H_target (12)
Remark this alternatively-spliced form is defined by yk1322g08.3 but the 5' and 3' splice sites in the penultimate intron are very unusual so this may not be real - 02-04-06 js
this isoform is based on EMBL accession BJ153734
Associated_feature WBsf000595
WBsf014560
Methodcurated